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| Field | Value |
|---|---|
| Gene ID | Lj1g3v5061270 |
| Transcript ID | Lj1g3v5061270.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATPase 10, plasma membrane-type-like [Cicer arietinum] gi|502114188|ref|XP_004494890.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | – | – | |
| SignalP | 1 | 17 | 17 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 5 | 12 | 8 | – | – | |
| Phobius | 13 | 17 | 5 | – | – | |
| Phobius | 18 | 284 | 267 | – | – | |
| PANTHER | 33 | 823 | 791 | 0 | – | |
| PANTHER | 33 | 823 | 791 | 0 | – | |
| SMART | 55 | 127 | 73 | 2.00E-22 | ||
| SUPERFAMILY | 55 | 172 | 118 | 1.70E-88 | – | |
| Pfam | 59 | 121 | 63 | 9.80E-14 | ||
| Gene3D | 70 | 106 | 37 | 3.70E-41 | ||
| TIGRFAM | 74 | 846 | 773 | 0 | ||
| TMHMM | 103 | 125 | 23 | – | – | |
| Gene3D | 107 | 166 | 60 | 1.70E-22 | ||
| TMHMM | 135 | 154 | 20 | – | – | |
| Pfam | 140 | 360 | 221 | 7.10E-61 | ||
| TIGRFAM | 141 | 389 | 249 | 7.10E-38 | ||
| Gene3D | 167 | 269 | 103 | 3.70E-41 | ||
| SUPERFAMILY | 172 | 269 | 98 | 9.15E-29 | – | |
| PRINTS | 219 | 233 | 15 | 9.00E-42 | – | |
| SUPERFAMILY | 269 | 363 | 95 | 1.70E-88 | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Gene3D | 285 | 389 | 105 | 1.70E-22 | ||
| Phobius | 285 | 307 | 23 | – | – | |
| Phobius | 308 | 318 | 11 | – | – | |
| TMHMM | 319 | 341 | 23 | – | – | |
| Phobius | 319 | 341 | 23 | – | – | |
| Phobius | 342 | 655 | 314 | – | – | |
| Pfam | 365 | 642 | 278 | 1.90E-18 | – | |
| SUPERFAMILY | 365 | 421 | 57 | 4.12E-39 | ||
| PRINTS | 369 | 383 | 15 | 9.00E-42 | – | |
| ProSitePatterns | 371 | 377 | 7 | – | ||
| Gene3D | 390 | 527 | 138 | 8.10E-34 | ||
| SUPERFAMILY | 450 | 675 | 226 | 4.12E-39 | ||
| PRINTS | 485 | 503 | 19 | 1.90E-59 | ||
| PRINTS | 523 | 534 | 12 | 9.00E-42 | – | |
| PRINTS | 545 | 555 | 11 | 9.00E-42 | – | |
| Gene3D | 594 | 885 | 292 | 3.20E-99 | ||
| PRINTS | 600 | 616 | 17 | 1.90E-59 | ||
| TIGRFAM | 603 | 713 | 111 | 7.40E-28 | ||
| PRINTS | 628 | 647 | 20 | 9.00E-42 | – | |
| PRINTS | 628 | 644 | 17 | 1.90E-59 | ||
| PRINTS | 651 | 663 | 13 | 9.00E-42 | – | |
| Phobius | 656 | 675 | 20 | – | – | |
| PRINTS | 659 | 684 | 26 | 1.90E-59 | ||
| Phobius | 676 | 686 | 11 | – | – | |
| SUPERFAMILY | 677 | 887 | 211 | 1.70E-88 | – | |
| Phobius | 687 | 709 | 23 | – | – | |
| TMHMM | 687 | 709 | 23 | – | – | |
| Phobius | 710 | 714 | 5 | – | – | |
| Phobius | 715 | 732 | 18 | – | – | |
| Phobius | 733 | 751 | 19 | – | – | |
| TMHMM | 751 | 773 | 23 | – | – | |
| Phobius | 752 | 774 | 23 | – | – | |
| Phobius | 775 | 793 | 19 | – | – | |
| Phobius | 794 | 814 | 21 | – | – | |
| PRINTS | 800 | 821 | 22 | 1.90E-59 | ||
| Phobius | 815 | 825 | 11 | – | – | |
| TMHMM | 825 | 847 | 23 | – | – | |
| Phobius | 826 | 851 | 26 | – | – | |
| Phobius | 852 | 856 | 5 | – | – | |
| TMHMM | 857 | 876 | 20 | – | – | |
| Phobius | 857 | 876 | 20 | – | – | |
| PANTHER | 860 | 927 | 68 | 0 | – | |
| PANTHER | 860 | 927 | 68 | 0 | – | |
| Phobius | 877 | 982 | 106 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of Lj1g3v5061270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v5061270.1, powered by CORGI.
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