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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0632820 |
| Transcript ID | Lj2g3v0632820.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transmembrane 9 superfamily protein member [Medicago truncatula] gi|357499551|ref|XP_003620064.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 591 | 591 | 0 | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 591 | 591 | 0 | ||
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 16 | 11 | – | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Phobius | 25 | 225 | 201 | – | – | |
| Pfam | 54 | 548 | 495 | 1.20E-169 | ||
| SUPERFAMILY | 226 | 408 | 183 | 4.45E-05 | ||
| Phobius | 226 | 249 | 24 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 250 | 290 | 41 | – | – | |
| Phobius | 291 | 319 | 29 | – | – | |
| TMHMM | 297 | 319 | 23 | – | – | |
| Phobius | 320 | 324 | 5 | – | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 325 | 349 | 25 | – | – | |
| Phobius | 350 | 360 | 11 | – | – | |
| Phobius | 361 | 384 | 24 | – | – | |
| TMHMM | 361 | 383 | 23 | – | – | |
| Phobius | 385 | 389 | 5 | – | – | |
| Phobius | 390 | 414 | 25 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 415 | 451 | 37 | – | – | |
| TMHMM | 450 | 472 | 23 | – | – | |
| Phobius | 452 | 471 | 20 | – | – | |
| Phobius | 472 | 482 | 11 | – | – | |
| Phobius | 483 | 509 | 27 | – | – | |
| TMHMM | 485 | 507 | 23 | – | – | |
| Phobius | 510 | 520 | 11 | – | – | |
| TMHMM | 517 | 539 | 23 | – | – | |
| Phobius | 521 | 541 | 21 | – | – | |
| Phobius | 542 | 552 | 11 | – | – | |
| TMHMM | 552 | 574 | 23 | – | – | |
| Phobius | 553 | 581 | 29 | – | – | |
| Phobius | 582 | 591 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0632820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0632820.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.