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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0636230 |
| Transcript ID | Lj2g3v0636230.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like [Cicer arietinum] gi|502183377|ref|XP_004517125.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 100 | 100 | – | – | |
| PANTHER | 48 | 412 | 365 | 2.40E-152 | – | |
| ProSiteProfiles | 66 | 100 | 35 | 7.739 | ||
| Pfam | 100 | 149 | 50 | 3.60E-07 | ||
| Phobius | 101 | 126 | 26 | – | – | |
| ProSiteProfiles | 101 | 135 | 35 | 9.208 | ||
| TIGRFAM | 103 | 135 | 33 | 1.20E-04 | ||
| Phobius | 127 | 137 | 11 | – | – | |
| ProSiteProfiles | 137 | 171 | 35 | 8.287 | ||
| Phobius | 138 | 158 | 21 | – | – | |
| Phobius | 159 | 445 | 287 | – | – | |
| Pfam | 167 | 197 | 31 | 1.40E-09 | ||
| ProSiteProfiles | 172 | 206 | 35 | 10.041 | ||
| TIGRFAM | 174 | 199 | 26 | 2.90E-05 | ||
| Gene3D | 182 | 345 | 164 | 1.20E-05 | ||
| Pfam | 209 | 257 | 49 | 6.80E-18 | ||
| ProSiteProfiles | 210 | 244 | 35 | 12.299 | ||
| SUPERFAMILY | 211 | 366 | 156 | 2.53E-05 | ||
| TIGRFAM | 212 | 245 | 34 | 8.50E-10 | ||
| ProSiteProfiles | 245 | 279 | 35 | 13.252 | ||
| TIGRFAM | 247 | 280 | 34 | 1.00E-09 | ||
| Pfam | 279 | 307 | 29 | 1.80E-06 | ||
| ProSiteProfiles | 280 | 314 | 35 | 11.685 | ||
| TIGRFAM | 285 | 316 | 32 | 3.00E-09 | ||
| Pfam | 314 | 363 | 50 | 5.00E-15 | ||
| ProSiteProfiles | 315 | 349 | 35 | 12.54 | ||
| TIGRFAM | 317 | 351 | 35 | 1.50E-09 | ||
| ProSiteProfiles | 350 | 384 | 35 | 10.578 | ||
| TIGRFAM | 353 | 385 | 33 | 3.70E-06 | ||
| Gene3D | 379 | 410 | 32 | 1.20E-05 | ||
| Pfam | 381 | 412 | 32 | 7.30E-08 | ||
| ProSiteProfiles | 385 | 419 | 35 | 9.799 | ||
| TIGRFAM | 387 | 415 | 29 | 3.70E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0636230.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0636230.2, powered by CORGI.
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