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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0892280 |
| Transcript ID | Lj2g3v0892280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat extensin-like protein 6-like [Cicer arietinum] gi|502164171|ref|XP_004513070.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Phobius | 22 | 420 | 399 | – | – | |
| PANTHER | 57 | 408 | 352 | 2.00E-221 | – | |
| PANTHER | 57 | 408 | 352 | 2.00E-221 | – | |
| Pfam | 74 | 111 | 38 | 2.10E-06 | ||
| Gene3D | 74 | 355 | 282 | 5.00E-68 | ||
| SUPERFAMILY | 76 | 356 | 281 | 1.81E-51 | ||
| Pfam | 146 | 201 | 56 | 6.20E-10 | ||
| ProSiteProfiles | 167 | 188 | 22 | 7.05 | ||
| PRINTS | 168 | 181 | 14 | 1.10E-05 | – | |
| ProSiteProfiles | 191 | 213 | 23 | 5.463 | ||
| ProSiteProfiles | 214 | 236 | 23 | 4.501 | ||
| PRINTS | 308 | 321 | 14 | 1.10E-05 | – | |
| ProSiteProfiles | 310 | 332 | 23 | 5.794 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0892280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0892280.1, powered by CORGI.
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