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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1012780 |
| Transcript ID | Lj2g3v1012780.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protease Do-like 1, chloroplastic-like [Cicer arietinum] gi|502090590|ref|XP_004489277.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Phobius | 25 | 433 | 409 | – | – | |
| PANTHER | 82 | 430 | 349 | 6.70E-205 | – | |
| PANTHER | 82 | 430 | 349 | 6.70E-205 | – | |
| Gene3D | 102 | 216 | 115 | 2.70E-32 | – | |
| SUPERFAMILY | 116 | 321 | 206 | 1.88E-57 | ||
| Pfam | 151 | 290 | 140 | 2.30E-35 | – | |
| PRINTS | 160 | 172 | 13 | 2.00E-45 | ||
| PRINTS | 181 | 201 | 21 | 2.00E-45 | ||
| Gene3D | 217 | 330 | 114 | 7.70E-43 | – | |
| PRINTS | 223 | 247 | 25 | 2.00E-45 | ||
| PRINTS | 261 | 278 | 18 | 2.00E-45 | ||
| PRINTS | 283 | 300 | 18 | 2.00E-45 | ||
| SUPERFAMILY | 287 | 417 | 131 | 1.45E-16 | ||
| ProSiteProfiles | 320 | 417 | 98 | 11.059 | ||
| Pfam | 329 | 425 | 97 | 7.70E-15 | ||
| CDD | 329 | 424 | 96 | 1.33E-17 | – | |
| SMART | 329 | 417 | 89 | 7.20E-10 | ||
| Gene3D | 331 | 432 | 102 | 1.50E-19 | ||
| PRINTS | 375 | 387 | 13 | 2.00E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj2g3v1012780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1012780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.