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PDZ domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Trypsin family protein with PDZ domain isoform 2, partial [Theobroma cacao] gi|508719582|gb|EOY11479.1| | 22 | ||
| – | Os11g0246600 [Oryza sativa Japonica Group] gi|297611567|ref|NP_001067609.2| | 14 | ||
| – | PREDICTED: protease Do-like 1, chloroplastic-like [Cicer arietinum] gi|502090590|ref|XP_004489277.1| | 21 | ||
| – | PREDICTED: protease Do-like 8, chloroplastic-like [Glycine max] gi|356550813|ref|XP_003543778.1| | 15 | ||
| – | PREDICTED: protease Do-like 9-like [Cicer arietinum] gi|502152268|ref|XP_004508846.1| | 17 | ||
| – | Carboxyl-terminal-processing protease [Medicago truncatula] gi|357519225|ref|XP_003629901.1| | 20 | ||
| – | Serine protease; TAIR: AT5G36950.1 DegP protease 10; Swiss-Prot: sp|Q9FIV6|DGP10_ARATH Protease Do-like 10, mitochondrial; TrEMBL-Plants: tr|I1KZS0|I1KZS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0236200 | 18 | ||
| – | Serine protease; TAIR: AT3G27925.1 DegP protease 1; Swiss-Prot: sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic; TrEMBL-Plants: tr|I3S8D7|I3S8D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0246100 | 23 | ||
| – | Serine protease; TAIR: AT3G27925.1 DegP protease 1; Swiss-Prot: sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic; TrEMBL-Plants: tr|I3S8D7|I3S8D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0246100 | 23 | ||
| – | Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 | 17 | ||
| – | Serine protease; TAIR: AT5G39830.1 Trypsin family protein with PDZ domain-containing protein; Swiss-Prot: sp|Q9LU10|DEGP8_ARATH Protease Do-like 8, chloroplastic; TrEMBL-Plants: tr|I3S3D5|I3S3D5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0259100 | 23 | ||
| – | Protease-like protein; TAIR: AT5G40200.1 DegP protease 9; Swiss-Prot: sp|Q9FL12|DEGP9_ARATH Protease Do-like 9; TrEMBL-Plants: tr|I1MTJ7|I1MTJ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0238700 | 21 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 8.33 |