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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1365820 |
| Transcript ID | Lj2g3v1365820.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Cicer arietinum] gi|502182992|ref|XP_004517036.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 61 | 115 | 55 | – | – | |
| SMART | 155 | 346 | 192 | 2.70E-32 | ||
| Gene3D | 159 | 346 | 188 | 3.30E-37 | ||
| Pfam | 162 | 315 | 154 | 2.00E-20 | ||
| PANTHER | 163 | 345 | 183 | 3.60E-13 | – | |
| PANTHER | 163 | 345 | 183 | 3.60E-13 | – | |
| ProSiteProfiles | 167 | 332 | 166 | 25.228 | ||
| SUPERFAMILY | 168 | 317 | 150 | 1.35E-44 | ||
| CDD | 174 | 313 | 140 | 2.26E-21 | – | |
| SUPERFAMILY | 409 | 464 | 56 | 1.35E-44 | ||
| PANTHER | 418 | 466 | 49 | 3.60E-13 | – | |
| PANTHER | 418 | 466 | 49 | 3.60E-13 | – | |
| ProSiteProfiles | 426 | 625 | 200 | 10.668 | ||
| Gene3D | 438 | 467 | 30 | 9.70E-18 | ||
| SMART | 493 | 579 | 87 | 1.10E-13 | ||
| SUPERFAMILY | 499 | 593 | 95 | 1.35E-44 | ||
| PANTHER | 501 | 542 | 42 | 3.60E-13 | – | |
| PANTHER | 501 | 542 | 42 | 3.60E-13 | – | |
| Gene3D | 502 | 586 | 85 | 9.70E-18 | ||
| CDD | 503 | 589 | 87 | 4.21E-09 | – | |
| Pfam | 518 | 579 | 62 | 9.10E-05 | ||
| PANTHER | 563 | 594 | 32 | 3.60E-13 | – | |
| PANTHER | 563 | 594 | 32 | 3.60E-13 | – | |
| Coils | 669 | 693 | 25 | – | – | |
| Coils | 704 | 731 | 28 | – | – | |
| PANTHER | 763 | 790 | 28 | 3.60E-13 | – | |
| PANTHER | 763 | 790 | 28 | 3.60E-13 | – | |
| Coils | 908 | 942 | 35 | – | – | |
| Coils | 955 | 975 | 21 | – | – | |
| PANTHER | 963 | 988 | 26 | 3.60E-13 | – | |
| PANTHER | 963 | 988 | 26 | 3.60E-13 | – | |
| SMART | 1002 | 1176 | 175 | 5.80E-51 | ||
| Pfam | 1007 | 1172 | 166 | 7.40E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj2g3v1365820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1365820.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.