Domain Predictions — View

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SM01142

Source: SMART

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3329390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine max] gi\|356527455\|ref\|XP_003532326.1\|	Domains Coil G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 SM00487 SM00490 SM01142 SSF52540 cd00046 cd00079 mobidb-lite	23
Lj2g3v1365820.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Cicer arietinum] gi\|502182992\|ref\|XP_004517036.1\|	Domains Coil G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR027417 PF00270 PF00271 PF08148 PS51192 PS51194 PTHR24031 PTHR24031:SF122 SM00487 SM00490 SM01142 SSF52540 cd00046 cd00079 mobidb-lite	21
Lj4g3v3015040.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine max] gi\|356523685\|ref\|XP_003530466.1\|	Domains Coil G3DSA:3.40.50.300 IPR012961 IPR025696 IPR027417 PF08148 PF13234 SM01142 SSF52540 cd13154	10
Lj4g3v3015040.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2-like [Glycine max] gi\|356513235\|ref\|XP_003525319.1\|	Domains Coil G3DSA:3.40.50.300 IPR001650 IPR012961 IPR025696 IPR027417 PF00271 PF08148 PF13234 PS51194 PTHR12131 PTHR12131:SF4 SM00490 SM01142 SSF52540 cd00079 cd13154 mobidb-lite	18
Lj6g3v0622070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: helicase SKI2W-like [Glycine max] gi\|356569566\|ref\|XP_003552970.1\|	Domains G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF08148 PF13234 PIRSF005198 PS51192 PS51194 SM00487 SM00490 SM01142 SSF52540 cd00046 cd00079 mobidb-lite	21
LotjaGi1g1v0553600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9XIF2\|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9; TrEMBL-Plants: tr\|A0A0B2QTI2\|A0A0B2QTI2_GLYSO Superkiller viralicidic activity 2-like 2; Found in the gene: LotjaGi1g1v0553600	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR012961 IPR025696 IPR027417 PF00271 PF08148 PF13234 PS51194 PTHR12131 PTHR12131:SF7 SM00490 SM01142 SSF52540 cd18795	19
LotjaGi1g1v0553600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9XIF2\|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9; TrEMBL-Plants: tr\|V7AZU7\|V7AZU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0553600	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF7 SM00487 SM00490 SM01142 SSF52540 cd18024 cd18795 mobidb-lite	28
LotjaGi2g1v0312600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT1G70070.1 DEAD/DEAH box helicase; Swiss-Prot: sp\|B9DFG3\|ISE2_ARATH DExH-box ATP-dependent RNA helicase DExH15 chloroplastic; TrEMBL-Plants: tr\|K7K1N0\|K7K1N0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0312600	Domains Coil G3DSA:1.10.3380.30 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR027417 PF00270 PF08148 PS51192 PS51194 PTHR24031 PTHR24031:SF664 SM00487 SM00490 SM01142 SSF52540 cd18024 cd18795 mobidb-lite	21
LotjaGi4g1v0439700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9ZVW2\|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr\|I1KPQ5\|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF13 SM00487 SM00490 SM01142 SSF52540 cd13154 cd18024 cd18795 mobidb-lite	29
LotjaGi4g1v0439700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|Q9ZVW2\|HEN2_ARATH DExH-box ATP-dependent RNA helicase DExH10; TrEMBL-Plants: tr\|I1KPQ5\|I1KPQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439700	Domains Coil G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 PF00270 PF00271 PF08148 PF13234 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF13 SM00487 SM00490 SM01142 SSF52540 cd13154 cd18024 cd18795 mobidb-lite	29
LotjaGi6g1v0134200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.2 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|I1N032\|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 IPR040801 PF00270 PF08148 PF13234 PF17911 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF15 SM00487 SM00490 SM01142 SSF52540 cd18027 cd18795 mobidb-lite	28
LotjaGi6g1v0134200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|I1N032\|I1N032_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 G3DSA:2.40.30.300 G3DSA:3.40.50.300 IPR001650 IPR011545 IPR012961 IPR014001 IPR016438 IPR025696 IPR027417 IPR040801 PF00270 PF08148 PF13234 PF17911 PIRSF005198 PS51192 PS51194 PTHR12131 PTHR12131:SF15 SM00487 SM00490 SM01142 SSF52540 cd18027 cd18795 mobidb-lite	28
LotjaGi6g1v0134200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	ATP-dependent RNA helicase family protein; TAIR: AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein; Swiss-Prot: sp\|F4JAA5\|SKI2_ARATH DExH-box ATP-dependent RNA helicase DExH11; TrEMBL-Plants: tr\|A0A0B2PAN8\|A0A0B2PAN8_GLYSO Helicase SKI2W; Found in the gene: LotjaGi6g1v0134200	Domains G3DSA:1.10.3380.30 G3DSA:1.20.1500.20 IPR012961 PF08148 PTHR12131 PTHR12131:SF15 SM01142	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SM01142	SMART	1	7.69