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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1455190 |
| Transcript ID | Lj2g3v1455190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like isoform X1 [Cicer arietinum] gi|502162656|ref|XP_004512571.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 92 | 91 | 2.10E-274 | – | |
| PANTHER | 2 | 92 | 91 | 2.10E-274 | – | |
| ProSiteProfiles | 93 | 127 | 35 | 7.333 | ||
| ProSiteProfiles | 153 | 187 | 35 | 9.821 | ||
| Pfam | 153 | 201 | 49 | 9.70E-08 | ||
| PANTHER | 158 | 671 | 514 | 2.10E-274 | – | |
| PANTHER | 158 | 671 | 514 | 2.10E-274 | – | |
| ProSiteProfiles | 188 | 222 | 35 | 9.438 | ||
| TIGRFAM | 190 | 224 | 35 | 7.90E-05 | ||
| Pfam | 219 | 250 | 32 | 1.20E-09 | ||
| ProSiteProfiles | 223 | 257 | 35 | 11.893 | ||
| Gene3D | 224 | 386 | 163 | 5.70E-07 | ||
| TIGRFAM | 225 | 258 | 34 | 2.00E-06 | ||
| SUPERFAMILY | 255 | 368 | 114 | 2.92E-05 | ||
| Pfam | 258 | 305 | 48 | 2.60E-15 | ||
| ProSiteProfiles | 258 | 292 | 35 | 13.033 | ||
| TIGRFAM | 260 | 293 | 34 | 2.70E-09 | ||
| ProSiteProfiles | 293 | 327 | 35 | 12.693 | ||
| TIGRFAM | 296 | 329 | 34 | 1.30E-09 | ||
| Pfam | 324 | 355 | 32 | 6.10E-11 | ||
| ProSiteProfiles | 328 | 362 | 35 | 12.003 | ||
| TIGRFAM | 330 | 360 | 31 | 1.10E-07 | ||
| ProSiteProfiles | 363 | 397 | 35 | 11.915 | ||
| Pfam | 364 | 410 | 47 | 1.90E-10 | ||
| TIGRFAM | 367 | 399 | 33 | 7.70E-09 | ||
| ProSiteProfiles | 398 | 432 | 35 | 10.216 | ||
| Gene3D | 398 | 520 | 123 | 7.50E-09 | ||
| TIGRFAM | 401 | 433 | 33 | 3.80E-05 | ||
| SUPERFAMILY | 405 | 532 | 128 | 2.92E-05 | ||
| Pfam | 432 | 481 | 50 | 7.50E-16 | ||
| ProSiteProfiles | 433 | 467 | 35 | 12.43 | ||
| TIGRFAM | 435 | 468 | 34 | 2.20E-09 | ||
| ProSiteProfiles | 468 | 502 | 35 | 11.762 | ||
| TIGRFAM | 471 | 503 | 33 | 4.20E-07 | ||
| ProSiteProfiles | 503 | 537 | 35 | 12.079 | ||
| Pfam | 503 | 549 | 47 | 4.90E-13 | ||
| TIGRFAM | 506 | 538 | 33 | 1.80E-09 | ||
| ProSiteProfiles | 538 | 572 | 35 | 11.564 | ||
| TIGRFAM | 540 | 574 | 35 | 3.00E-07 | ||
| Pfam | 572 | 620 | 49 | 2.80E-11 | ||
| ProSiteProfiles | 573 | 607 | 35 | 10.578 | ||
| TIGRFAM | 576 | 608 | 33 | 6.00E-04 | ||
| Gene3D | 576 | 679 | 104 | 7.50E-09 | ||
| ProSiteProfiles | 608 | 642 | 35 | 11.411 | ||
| TIGRFAM | 610 | 643 | 34 | 4.50E-08 | ||
| Pfam | 643 | 689 | 47 | 4.60E-08 | ||
| ProSiteProfiles | 643 | 677 | 35 | 11.005 | ||
| TIGRFAM | 646 | 678 | 33 | 9.60E-06 | ||
| PANTHER | 738 | 783 | 46 | 2.10E-274 | – | |
| PANTHER | 738 | 783 | 46 | 2.10E-274 | – | |
| Pfam | 741 | 790 | 50 | 5.50E-14 | ||
| ProSiteProfiles | 742 | 776 | 35 | 12.945 | ||
| TIGRFAM | 745 | 778 | 34 | 8.20E-08 | ||
| ProSiteProfiles | 777 | 811 | 35 | 9.317 | ||
| Gene3D | 778 | 843 | 66 | 7.50E-09 | ||
| TIGRFAM | 780 | 809 | 30 | 2.60E-06 | ||
| ProSiteProfiles | 812 | 846 | 35 | 7.421 | ||
| ProSiteProfiles | 847 | 881 | 35 | 10.008 | ||
| TIGRFAM | 849 | 880 | 32 | 1.60E-04 | ||
| Pfam | 849 | 879 | 31 | 6.10E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1455190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1455190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.