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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1560840 |
| Transcript ID | Lj2g3v1560840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 14-like [Glycine max] gi|356538433|ref|XP_003537708.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 414 | 414 | – | – | |
| PANTHER | 6 | 656 | 651 | 0 | – | |
| PANTHER | 6 | 656 | 651 | 0 | – | |
| CDD | 52 | 289 | 238 | 2.29E-74 | – | |
| ProSiteProfiles | 55 | 307 | 253 | 19.388 | ||
| Gene3D | 80 | 296 | 217 | 1.70E-49 | ||
| SUPERFAMILY | 80 | 299 | 220 | 5.95E-47 | ||
| Pfam | 85 | 235 | 151 | 1.30E-24 | ||
| SMART | 94 | 284 | 191 | 1.20E-10 | ||
| ProSitePatterns | 207 | 221 | 15 | – | ||
| Pfam | 394 | 600 | 207 | 1.40E-36 | ||
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 415 | 432 | 18 | – | – | |
| Phobius | 433 | 443 | 11 | – | – | |
| TMHMM | 444 | 466 | 23 | – | – | |
| Phobius | 444 | 466 | 23 | – | – | |
| Phobius | 467 | 486 | 20 | – | – | |
| TMHMM | 487 | 509 | 23 | – | – | |
| Phobius | 487 | 510 | 24 | – | – | |
| Phobius | 511 | 521 | 11 | – | – | |
| Phobius | 522 | 546 | 25 | – | – | |
| TMHMM | 524 | 546 | 23 | – | – | |
| Phobius | 547 | 552 | 6 | – | – | |
| TMHMM | 553 | 575 | 23 | – | – | |
| Phobius | 553 | 572 | 20 | – | – | |
| Phobius | 573 | 629 | 57 | – | – | |
| TMHMM | 630 | 652 | 23 | – | – | |
| Phobius | 630 | 652 | 23 | – | – | |
| Phobius | 653 | 656 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj2g3v1560840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1560840.1, powered by CORGI.
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