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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002920 |
| Transcript ID | Lj2g3v2002920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | subtilase [Lotus japonicus] gi|163644223|dbj|BAF95754.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 743 | 743 | 0 | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 743 | 743 | 0 | ||
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 17 | 14 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Phobius | 18 | 24 | 7 | – | – | |
| Phobius | 25 | 805 | 781 | – | – | |
| Pfam | 44 | 120 | 77 | 4.50E-12 | ||
| SUPERFAMILY | 119 | 375 | 257 | 7.20E-81 | ||
| CDD | 119 | 570 | 452 | 9.15E-126 | – | |
| Gene3D | 136 | 346 | 211 | 4.20E-78 | ||
| PRINTS | 143 | 162 | 20 | 1.50E-18 | ||
| Pfam | 143 | 582 | 440 | 6.90E-49 | ||
| ProSitePatterns | 148 | 159 | 12 | – | ||
| PRINTS | 207 | 220 | 14 | 1.50E-18 | ||
| CDD | 343 | 471 | 129 | 1.06E-40 | – | |
| Gene3D | 364 | 470 | 107 | 1.20E-11 | – | |
| SUPERFAMILY | 368 | 464 | 97 | 9.68E-06 | – | |
| Pfam | 369 | 457 | 89 | 1.70E-11 | ||
| Gene3D | 482 | 602 | 121 | 4.20E-78 | ||
| SUPERFAMILY | 486 | 607 | 122 | 7.20E-81 | ||
| PRINTS | 533 | 549 | 17 | 1.50E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj2g3v2002920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002920.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.