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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2314850 |
| Transcript ID | Lj2g3v2314850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Leucine zipper protein [Medicago truncatula] gi|357491217|ref|XP_003615896.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 36 | 36 | – | – | |
| Phobius | 20 | 31 | 12 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 32 | 36 | 5 | – | – | |
| Phobius | 37 | 45 | 9 | – | – | |
| Phobius | 46 | 67 | 22 | – | – | |
| TMHMM | 46 | 68 | 23 | – | – | |
| Phobius | 68 | 78 | 11 | – | – | |
| Phobius | 79 | 96 | 18 | – | – | |
| TMHMM | 81 | 98 | 18 | – | – | |
| Phobius | 97 | 107 | 11 | – | – | |
| Phobius | 108 | 124 | 17 | – | – | |
| TMHMM | 108 | 125 | 18 | – | – | |
| Phobius | 125 | 135 | 11 | – | – | |
| Phobius | 136 | 164 | 29 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 165 | 1232 | 1068 | – | – | |
| SUPERFAMILY | 231 | 553 | 323 | 6.80E-69 | ||
| PANTHER | 235 | 526 | 292 | 8.80E-163 | ||
| PANTHER | 235 | 526 | 292 | 8.80E-163 | – | |
| Pfam | 318 | 553 | 236 | 2.00E-59 | ||
| SUPERFAMILY | 592 | 651 | 60 | 7.45E-24 | ||
| Gene3D | 592 | 651 | 60 | 3.10E-25 | ||
| SMART | 593 | 652 | 60 | 5.00E-33 | ||
| Pfam | 594 | 650 | 57 | 1.10E-22 | ||
| ProSiteProfiles | 594 | 648 | 55 | 20.392 | ||
| SUPERFAMILY | 808 | 1232 | 425 | 2.04E-74 | ||
| Coils | 873 | 893 | 21 | – | – | |
| Pfam | 895 | 1231 | 337 | 5.60E-71 | ||
| Coils | 1067 | 1087 | 21 | – | – | |
| PANTHER | 1107 | 1232 | 126 | 8.80E-163 | – | |
| PANTHER | 1107 | 1232 | 126 | 8.80E-163 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of Lj2g3v2314850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2314850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.