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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2878430 |
| Transcript ID | Lj2g3v2878430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein [Theobroma cacao] gi|508720006|gb|EOY11903.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | – | – | |
| PANTHER | 36 | 178 | 143 | 0 | – | |
| PANTHER | 36 | 178 | 143 | 0 | – | |
| SUPERFAMILY | 38 | 172 | 135 | 3.07E-25 | ||
| Gene3D | 39 | 172 | 134 | 2.70E-29 | ||
| SMART | 41 | 74 | 34 | 3.8 | ||
| ProSiteProfiles | 41 | 148 | 108 | 14.953 | ||
| ProSiteProfiles | 41 | 74 | 34 | 8.762 | ||
| SMART | 79 | 114 | 36 | 200 | ||
| SMART | 115 | 148 | 34 | 0.22 | ||
| ProSiteProfiles | 115 | 148 | 34 | 8.142 | ||
| MobiDBLite | 197 | 272 | 76 | – | – | |
| SUPERFAMILY | 281 | 352 | 72 | 2.69E-14 | – | |
| SMART | 284 | 376 | 93 | 3.40E-17 | ||
| ProSiteProfiles | 284 | 376 | 93 | 12.631 | ||
| Pfam | 285 | 373 | 89 | 3.00E-19 | ||
| CDD | 287 | 346 | 60 | 4.68E-09 | – | |
| Gene3D | 287 | 351 | 65 | 5.20E-11 | – | |
| PANTHER | 375 | 724 | 350 | 0 | – | |
| PANTHER | 375 | 724 | 350 | 0 | – | |
| MobiDBLite | 377 | 441 | 65 | – | – | |
| Gene3D | 489 | 637 | 149 | 2.10E-04 | ||
| SUPERFAMILY | 490 | 586 | 97 | 2.06E-05 | ||
| Coils | 610 | 630 | 21 | – | – | |
| MobiDBLite | 629 | 671 | 43 | – | – | |
| MobiDBLite | 740 | 762 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2878430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2878430.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.