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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2925160 |
| Transcript ID | Lj2g3v2925160.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | – | – | |
| PANTHER | 63 | 93 | 31 | 0 | – | |
| PANTHER | 63 | 93 | 31 | 0 | ||
| PANTHER | 127 | 306 | 180 | 0 | ||
| PANTHER | 127 | 306 | 180 | 0 | – | |
| PANTHER | 383 | 956 | 574 | 0 | ||
| PANTHER | 383 | 956 | 574 | 0 | – | |
| SUPERFAMILY | 409 | 654 | 246 | 3.60E-32 | ||
| Gene3D | 421 | 581 | 161 | 7.30E-23 | ||
| CDD | 422 | 573 | 152 | 9.60E-12 | – | |
| SMART | 424 | 576 | 153 | 8.10E-11 | ||
| Pfam | 428 | 573 | 146 | 1.40E-15 | ||
| Gene3D | 582 | 657 | 76 | 9.90E-05 | – | |
| Gene3D | 676 | 856 | 181 | 6.60E-55 | ||
| SUPERFAMILY | 677 | 939 | 263 | 4.22E-58 | ||
| CDD | 707 | 844 | 138 | 9.23E-22 | – | |
| SMART | 711 | 847 | 137 | 2.40E-14 | ||
| Pfam | 715 | 842 | 128 | 2.20E-38 | ||
| ProSitePatterns | 815 | 833 | 19 | – | ||
| Gene3D | 857 | 932 | 76 | 3.00E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Peroxisomal membrane | The lipid bilayer surrounding a peroxisome. | ||
| Biological process | Protein targeting to peroxisome | The process of directing proteins towards the peroxisome, usually using signals contained within the protein. | ||
| Molecular function | ATPase activity, coupled | Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction directly drives some other reaction, for example ion transport across a membrane. |
Expression pattern of Lj2g3v2925160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2925160.1, powered by CORGI.
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