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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3055280 |
| Transcript ID | Lj2g3v3055280.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 547 | 547 | – | – | |
| ProSiteProfiles | 109 | 144 | 36 | 5.009 | ||
| PANTHER | 162 | 723 | 562 | 0 | – | |
| PANTHER | 162 | 723 | 562 | 0 | – | |
| ProSiteProfiles | 162 | 196 | 35 | 7.596 | ||
| ProSiteProfiles | 197 | 231 | 35 | 8.473 | ||
| Pfam | 198 | 245 | 48 | 4.80E-09 | ||
| TIGRFAM | 200 | 232 | 33 | 2.50E-04 | ||
| ProSiteProfiles | 232 | 266 | 35 | 10.874 | ||
| TIGRFAM | 234 | 267 | 34 | 1.50E-05 | ||
| Pfam | 267 | 315 | 49 | 1.60E-17 | ||
| ProSiteProfiles | 267 | 301 | 35 | 13.504 | ||
| TIGRFAM | 269 | 301 | 33 | 2.80E-09 | ||
| ProSiteProfiles | 302 | 336 | 35 | 13.515 | ||
| TIGRFAM | 304 | 338 | 35 | 3.10E-11 | ||
| Gene3D | 306 | 353 | 48 | 8.10E-07 | ||
| SUPERFAMILY | 312 | 536 | 225 | 8.63E-06 | – | |
| Pfam | 325 | 384 | 60 | 1.20E-08 | ||
| ProSiteProfiles | 337 | 371 | 35 | 12.047 | ||
| TIGRFAM | 340 | 372 | 33 | 2.30E-06 | ||
| ProSiteProfiles | 372 | 406 | 35 | 11.389 | ||
| TIGRFAM | 374 | 407 | 34 | 2.50E-06 | ||
| Pfam | 403 | 435 | 33 | 9.00E-13 | ||
| ProSiteProfiles | 407 | 441 | 35 | 12.167 | ||
| TIGRFAM | 409 | 443 | 35 | 4.80E-10 | ||
| Pfam | 442 | 490 | 49 | 5.50E-18 | ||
| ProSiteProfiles | 442 | 476 | 35 | 14.261 | ||
| TIGRFAM | 444 | 477 | 34 | 5.10E-12 | ||
| Gene3D | 445 | 548 | 104 | 8.10E-07 | ||
| ProSiteProfiles | 477 | 511 | 35 | 12.364 | ||
| TIGRFAM | 479 | 513 | 35 | 1.00E-08 | ||
| Pfam | 511 | 560 | 50 | 1.10E-17 | ||
| ProSiteProfiles | 512 | 546 | 35 | 13.45 | ||
| TIGRFAM | 514 | 547 | 34 | 4.00E-11 | ||
| ProSiteProfiles | 547 | 581 | 35 | 13.143 | ||
| Phobius | 548 | 568 | 21 | – | – | |
| TIGRFAM | 549 | 582 | 34 | 1.20E-09 | ||
| Phobius | 569 | 725 | 157 | – | – | |
| Pfam | 581 | 628 | 48 | 2.20E-13 | ||
| ProSiteProfiles | 582 | 616 | 35 | 11.564 | ||
| TIGRFAM | 584 | 618 | 35 | 3.60E-08 | ||
| SUPERFAMILY | 585 | 718 | 134 | 5.23E-06 | – | |
| ProSiteProfiles | 617 | 651 | 35 | 12.156 | ||
| TIGRFAM | 619 | 652 | 34 | 2.90E-09 | ||
| Pfam | 651 | 698 | 48 | 1.40E-16 | ||
| ProSiteProfiles | 652 | 686 | 35 | 14.502 | ||
| Gene3D | 653 | 712 | 60 | 8.10E-07 | ||
| TIGRFAM | 654 | 687 | 34 | 2.90E-11 | ||
| ProSiteProfiles | 687 | 721 | 35 | 12.057 | ||
| TIGRFAM | 690 | 722 | 33 | 5.30E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3055280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3055280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.