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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3110960 |
| Transcript ID | Lj2g3v3110960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Citrate synthase [Medicago truncatula] gi|357494363|ref|XP_003617470.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 29 | 29 | – | – | |
| Phobius | 16 | 24 | 9 | – | – | |
| Phobius | 25 | 29 | 5 | – | – | |
| PANTHER | 28 | 490 | 463 | 2.70E-290 | – | |
| PANTHER | 28 | 490 | 463 | 2.70E-290 | ||
| Phobius | 30 | 512 | 483 | – | – | |
| CDD | 73 | 481 | 409 | 0 | – | |
| SUPERFAMILY | 86 | 485 | 400 | 4.58E-142 | ||
| Pfam | 100 | 468 | 369 | 1.80E-132 | ||
| Gene3D | 106 | 340 | 235 | 3.20E-89 | ||
| PRINTS | 225 | 238 | 14 | 2.30E-44 | ||
| PRINTS | 279 | 294 | 16 | 2.30E-44 | ||
| PRINTS | 301 | 329 | 29 | 2.30E-44 | ||
| Gene3D | 341 | 430 | 90 | 5.90E-40 | ||
| PRINTS | 354 | 374 | 21 | 2.30E-44 | ||
| ProSitePatterns | 361 | 373 | 13 | – | ||
| PRINTS | 416 | 432 | 17 | 2.30E-44 | ||
| PRINTS | 436 | 450 | 15 | 2.30E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer. |
Expression pattern of Lj2g3v3110960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3110960.1, powered by CORGI.
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