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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3223920 |
| Transcript ID | Lj2g3v3223920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561450|ref|XP_003548994.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 554 | 554 | 3.00E-270 | – | |
| Phobius | 1 | 510 | 510 | – | – | |
| PANTHER | 1 | 554 | 554 | 3.00E-270 | – | |
| Gene3D | 2 | 144 | 143 | 8.40E-21 | ||
| SUPERFAMILY | 2 | 149 | 148 | 1.66E-19 | ||
| SMART | 20 | 47 | 28 | 60 | ||
| ProSiteProfiles | 22 | 43 | 22 | 5.394 | ||
| Pfam | 43 | 57 | 15 | 0.38 | ||
| ProSiteProfiles | 44 | 66 | 23 | 7.442 | ||
| PRINTS | 45 | 58 | 14 | 7.10E-06 | – | |
| SMART | 66 | 93 | 28 | 250 | – | |
| SMART | 66 | 90 | 25 | 200 | ||
| ProSiteProfiles | 68 | 89 | 22 | 6.426 | ||
| ProSiteProfiles | 93 | 114 | 22 | 4.555 | ||
| ProSiteProfiles | 119 | 140 | 22 | 5.741 | ||
| SUPERFAMILY | 136 | 321 | 186 | 2.55E-64 | ||
| Gene3D | 145 | 317 | 173 | 2.20E-44 | ||
| SMART | 146 | 170 | 25 | 13 | ||
| PRINTS | 146 | 159 | 14 | 7.10E-06 | – | |
| SMART | 146 | 172 | 27 | 30 | – | |
| ProSiteProfiles | 148 | 170 | 23 | 6.642 | ||
| Pfam | 148 | 207 | 60 | 8.30E-09 | ||
| ProSiteProfiles | 172 | 195 | 24 | 5.54 | ||
| SMART | 194 | 217 | 24 | 220 | ||
| ProSiteProfiles | 196 | 217 | 22 | 4.901 | ||
| ProSiteProfiles | 220 | 243 | 24 | 5.078 | ||
| Pfam | 241 | 257 | 17 | 0.36 | ||
| SMART | 242 | 268 | 27 | 89 | – | |
| ProSiteProfiles | 244 | 267 | 24 | 6.695 | ||
| SMART | 266 | 289 | 24 | 180 | ||
| ProSiteProfiles | 268 | 289 | 22 | 4.601 | ||
| Gene3D | 369 | 480 | 112 | 5.60E-29 | ||
| SUPERFAMILY | 371 | 480 | 110 | 2.55E-64 | ||
| ProSiteProfiles | 391 | 410 | 20 | 5.048 | ||
| Pfam | 392 | 450 | 59 | 1.00E-07 | ||
| SMART | 413 | 437 | 25 | 52 | ||
| SMART | 413 | 439 | 27 | 97 | – | |
| ProSiteProfiles | 415 | 437 | 23 | 6.072 | ||
| ProSiteProfiles | 439 | 460 | 22 | 5.664 | ||
| TMHMM | 510 | 532 | 23 | – | – | |
| Phobius | 511 | 531 | 21 | – | – | |
| Phobius | 532 | 555 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3223920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3223920.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.