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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3337370 |
| Transcript ID | Lj2g3v3337370.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 4 | 12 | 9 | – | – | |
| Phobius | 13 | 19 | 7 | – | – | |
| Phobius | 20 | 879 | 860 | – | – | |
| PANTHER | 29 | 672 | 644 | 1.20E-169 | – | |
| PANTHER | 29 | 672 | 644 | 1.20E-169 | – | |
| Coils | 69 | 89 | 21 | – | – | |
| SUPERFAMILY | 154 | 406 | 253 | 6.43E-47 | ||
| CDD | 158 | 288 | 131 | 1.44E-04 | – | |
| Gene3D | 163 | 300 | 138 | 7.00E-17 | ||
| Pfam | 163 | 426 | 264 | 7.20E-57 | ||
| PRINTS | 176 | 191 | 16 | 5.10E-20 | – | |
| PRINTS | 249 | 263 | 15 | 5.10E-20 | – | |
| PRINTS | 342 | 356 | 15 | 5.10E-20 | – | |
| SUPERFAMILY | 467 | 643 | 177 | 6.46E-22 | ||
| Gene3D | 500 | 630 | 131 | 2.10E-19 | ||
| PRINTS | 567 | 583 | 17 | 5.10E-20 | – | |
| Gene3D | 708 | 834 | 127 | 2.10E-19 | ||
| SUPERFAMILY | 731 | 871 | 141 | 6.46E-22 | ||
| PANTHER | 783 | 874 | 92 | 1.20E-169 | – | |
| PANTHER | 783 | 874 | 92 | 1.20E-169 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj2g3v3337370.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3337370.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.