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Lj3g3v0718250.1

Overview

Field Value
Gene ID Lj3g3v0718250
Transcript ID Lj3g3v0718250.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Cicer arietinum] gi|502155914|ref|XP_004510236.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10516
19 244 226 1.60E-280
IPR023566
PANTHER
PTHR10516:SF324
19 244 226 1.60E-280 –
Gene3D
G3DSA:3.10.50.40
31 147 117 3.00E-52 –
SUPERFAMILY
SSF54534
36 158 123 6.87E-45 –
Pfam
PF00254
53 142 90 3.00E-33
IPR001179
ProSiteProfiles
PS50059
57 145 89 31.983
IPR001179
Gene3D
G3DSA:3.10.50.40
148 261 114 7.80E-31 –
SUPERFAMILY
SSF54534
149 265 117 6.87E-24 –
Pfam
PF00254
169 258 90 1.50E-15
IPR001179
ProSiteProfiles
PS50059
173 262 90 18.372
IPR001179
Gene3D
G3DSA:3.10.50.40
263 404 142 2.10E-38 –
SUPERFAMILY
SSF54534
267 400 134 2.95E-31 –
Pfam
PF00254
286 380 95 3.70E-20
IPR001179
ProSiteProfiles
PS50059
290 383 94 22.043
IPR001179
SUPERFAMILY
SSF48452
389 548 160 3.35E-31
IPR011990
SMART
SM00028
400 433 34 19
IPR019734
ProSiteProfiles
PS50005
400 433 34 7.08
IPR019734
PANTHER
PTHR10516
400 570 171 1.60E-280
IPR023566
PANTHER
PTHR10516:SF324
400 570 171 1.60E-280 –
Gene3D
G3DSA:1.25.40.10
405 552 148 1.80E-31
IPR011990
ProSiteProfiles
PS50293
407 516 110 15.054
IPR013026
SMART
SM00028
449 482 34 0.04
IPR019734
ProSiteProfiles
PS50005
449 482 34 5.34
IPR019734
SMART
SM00028
483 516 34 1.80E-06
IPR019734
ProSiteProfiles
PS50005
483 516 34 10.502
IPR019734
Pfam
PF00515
483 516 34 1.40E-07
IPR001440
Coils
Coil
516 536 21 – –
MobiDBLite
mobidb-lite
552 573 22 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003755
Molecular function Peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj3g3v0718250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0718250.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.