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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2576800 |
| Transcript ID | Lj3g3v2576800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 747 | 747 | 0 | ||
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 747 | 747 | 0 | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 747 | 723 | – | – | |
| Gene3D | 27 | 97 | 71 | 2.00E-09 | ||
| SUPERFAMILY | 29 | 108 | 80 | 2.55E-07 | ||
| Pfam | 31 | 109 | 79 | 7.60E-18 | ||
| Gene3D | 98 | 342 | 245 | 3.40E-81 | ||
| CDD | 107 | 549 | 443 | 1.95E-139 | – | |
| SUPERFAMILY | 108 | 381 | 274 | 2.75E-79 | ||
| PRINTS | 132 | 151 | 20 | 3.40E-14 | ||
| Pfam | 133 | 554 | 422 | 1.80E-52 | ||
| PRINTS | 211 | 224 | 14 | 3.40E-14 | ||
| CDD | 349 | 437 | 89 | 2.92E-24 | – | |
| Gene3D | 371 | 434 | 64 | 7.10E-05 | – | |
| Pfam | 374 | 452 | 79 | 1.80E-07 | ||
| Gene3D | 456 | 587 | 132 | 3.40E-81 | ||
| SUPERFAMILY | 459 | 587 | 129 | 2.75E-79 | ||
| PRINTS | 512 | 528 | 17 | 3.40E-14 | ||
| ProSitePatterns | 513 | 523 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj3g3v2576800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2576800.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.