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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2719850 |
| Transcript ID | Lj3g3v2719850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356522765|ref|XP_003530016.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| Phobius | 6 | 14 | 9 | – | – | |
| PANTHER | 7 | 430 | 424 | 1.50E-261 | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| PANTHER | 7 | 430 | 424 | 1.50E-261 | – | |
| Phobius | 15 | 18 | 4 | – | – | |
| Phobius | 19 | 437 | 419 | – | – | |
| PIRSF | 37 | 430 | 394 | 1.30E-129 | ||
| Gene3D | 47 | 214 | 168 | 9.00E-106 | – | |
| SUPERFAMILY | 47 | 233 | 187 | 3.29E-85 | – | |
| TIGRFAM | 52 | 413 | 362 | 2.80E-113 | ||
| CDD | 52 | 427 | 376 | 0 | – | |
| Pfam | 109 | 422 | 314 | 2.00E-34 | ||
| Gene3D | 217 | 337 | 121 | 2.70E-42 | ||
| Pfam | 218 | 312 | 95 | 4.00E-11 | ||
| SUPERFAMILY | 218 | 327 | 110 | 4.84E-29 | ||
| SUPERFAMILY | 338 | 428 | 91 | 3.29E-85 | – | |
| Gene3D | 338 | 430 | 93 | 9.00E-106 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of Lj3g3v2719850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2719850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.