Domain Predictions — View

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cd08017

Source: CDD

Description

M20_IAA_Hyd

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0841430.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] gi\|356515913\|ref\|XP_003526641.1\|	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF62 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TIGR01891 cd08017	22
Lj3g3v2718800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi\|356550474\|ref\|XP_003543612.1\|	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF55 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TIGR01891 cd08017	21
Lj3g3v2719850.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi\|356522765\|ref\|XP_003530016.1\|	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF55 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM_EUK TIGR01891 TMhelix cd08017	21
Lj3g3v2719860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi\|356522765\|ref\|XP_003530016.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF55 SSF53187 SSF55031 TIGR01891 TMhelix TRANSMEMBRANE cd08017	18
Lj3g3v2719870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi\|356522765\|ref\|XP_003530016.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF55 SSF53187 SSF55031 SignalP-TM_EUK TIGR01891 TMhelix TRANSMEMBRANE cd08017	19
LotjaGi1g1v0262400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1, putative; TAIR: AT1G44350.1 IAA-amino acid hydrolase ILR1-like 6; Swiss-Prot: sp\|Q8VYX0\|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6; TrEMBL-Plants: tr\|I1KAC2\|I1KAC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0262400	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF62 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM SignalP-noTM TIGR01891 cd08017	22
LotjaGi1g1v0300800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1, putative; TAIR: AT5G54140.1 IAA-leucine-resistant (ILR1)-like 3; Swiss-Prot: sp\|Q7XUA8\|ILL5_ORYSJ IAA-amino acid hydrolase ILR1-like 5; TrEMBL-Plants: tr\|I3STS5\|I3STS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0300800	Domains Coil G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF140 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-noTM TIGR01891 cd08017	22
LotjaGi1g1v0575200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Copper transporter, putative; TAIR: AT2G26975.1 Ctr copper transporter family; Swiss-Prot: sp\|Q8GWP3\|COPT6_ARATH Copper transporter 6; TrEMBL-Plants: tr\|I3T3C3\|I3T3C3_MEDTR Ctr family copper transporter; Found in the gene: LotjaGi1g1v0575200	Domains CYTOPLASMIC_DOMAIN IPR007274 NON_CYTOPLASMIC_DOMAIN PF04145 PTHR12483 PTHR12483:SF41 TMhelix TRANSMEMBRANE cd08017	9
LotjaGi3g1v0022900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I1M5E5\|I1M5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0022900	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-noTM TIGR01891 cd08017	21
LotjaGi3g1v0428600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM TIGR01891 TMhelix cd08017	22
LotjaGi3g1v0428600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM TIGR01891 TMhelix cd08017	22
LotjaGi3g1v0428600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR017439 NON_CYTOPLASMIC_DOMAIN PF01546 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SignalP-TM TIGR01891 TMhelix cd08017	17
LotjaGi3g1v0428700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SSF53187 SSF55031 TIGR01891 TMhelix TRANSMEMBRANE cd08017	19
LotjaGi3g1v0428800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428800	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-TM TIGR01891 TMhelix cd08017	22
LotjaGi3g1v0429000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp\|O04373\|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr\|I3T1Y7\|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0429000	Domains G3DSA:3.30.70.360 G3DSA:3.40.630.10 IPR002933 IPR011650 IPR017439 IPR036264 NON_CYTOPLASMIC_DOMAIN PF01546 PF07687 PIRSF005962 PTHR11014 PTHR11014:SF148 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53187 SSF55031 SignalP-noTM TIGR01891 TMhelix cd08017	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd08017	CDD	1	6.67