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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3082280 |
| Transcript ID | Lj3g3v3082280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 28-like [Cicer arietinum] gi|502145594|ref|XP_004506093.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 401 | 401 | – | – | |
| PANTHER | 1 | 298 | 298 | 0 | – | |
| PANTHER | 1 | 298 | 298 | 0 | – | |
| Gene3D | 18 | 252 | 235 | 3.30E-48 | ||
| CDD | 21 | 247 | 227 | 1.01E-75 | – | |
| ProSiteProfiles | 23 | 264 | 242 | 17.627 | ||
| SUPERFAMILY | 24 | 262 | 239 | 2.43E-42 | ||
| Pfam | 42 | 192 | 151 | 1.80E-25 | ||
| SMART | 49 | 250 | 202 | 2.20E-10 | ||
| ProSitePatterns | 164 | 178 | 15 | – | ||
| PANTHER | 331 | 579 | 249 | 0 | – | |
| PANTHER | 331 | 579 | 249 | 0 | – | |
| TMHMM | 402 | 419 | 18 | – | – | |
| Phobius | 402 | 419 | 18 | – | – | |
| Phobius | 420 | 424 | 5 | – | – | |
| Phobius | 425 | 445 | 21 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 446 | 456 | 11 | – | – | |
| Phobius | 457 | 473 | 17 | – | – | |
| Phobius | 474 | 478 | 5 | – | – | |
| TMHMM | 479 | 496 | 18 | – | – | |
| Phobius | 479 | 496 | 18 | – | – | |
| Phobius | 497 | 507 | 11 | – | – | |
| Phobius | 508 | 527 | 20 | – | – | |
| TMHMM | 509 | 528 | 20 | – | – | |
| Phobius | 528 | 532 | 5 | – | – | |
| Phobius | 533 | 550 | 18 | – | – | |
| TMHMM | 533 | 550 | 18 | – | – | |
| Phobius | 551 | 585 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj3g3v3082280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3082280.1, powered by CORGI.
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