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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3087270 |
| Transcript ID | Lj3g3v3087270.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356542569|ref|XP_003539739.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 421 | 421 | – | – | |
| PANTHER | 7 | 776 | 770 | 0 | ||
| PANTHER | 7 | 776 | 770 | 0 | – | |
| PIRSF | 9 | 776 | 768 | 1.00E-253 | ||
| Pfam | 37 | 776 | 740 | 3.00E-258 | ||
| Coils | 99 | 126 | 28 | – | – | |
| Phobius | 422 | 445 | 24 | – | – | |
| TMHMM | 424 | 446 | 23 | – | – | |
| Phobius | 446 | 465 | 20 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 466 | 484 | 19 | – | – | |
| Phobius | 485 | 546 | 62 | – | – | |
| Phobius | 547 | 565 | 19 | – | – | |
| TMHMM | 549 | 571 | 23 | – | – | |
| Phobius | 566 | 584 | 19 | – | – | |
| TMHMM | 584 | 606 | 23 | – | – | |
| Phobius | 585 | 602 | 18 | – | – | |
| Phobius | 603 | 636 | 34 | – | – | |
| Phobius | 637 | 654 | 18 | – | – | |
| TMHMM | 638 | 660 | 23 | – | – | |
| Phobius | 655 | 712 | 58 | – | – | |
| Phobius | 713 | 735 | 23 | – | – | |
| Phobius | 736 | 754 | 19 | – | – | |
| TMHMM | 755 | 774 | 20 | – | – | |
| Phobius | 755 | 775 | 21 | – | – | |
| Phobius | 776 | 776 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase, V0 domain | The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane. | ||
| Molecular function | Proton transmembrane transporter activity | Enables the transfer of a proton from one side of a membrane to the other. | ||
| Cellular component | Proton-transporting V-type ATPase, V0 domain | A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of Lj3g3v3087270.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3087270.2, powered by CORGI.
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