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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3117660 |
| Transcript ID | Lj3g3v3117660.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | phototropin [Phaseolus vulgaris] gi|60099454|dbj|BAD89966.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 64 | 64 | – | – | |
| MobiDBLite | 107 | 152 | 46 | – | – | |
| ProSiteProfiles | 155 | 226 | 72 | 12.453 | ||
| SMART | 157 | 226 | 70 | 0.12 | ||
| Gene3D | 169 | 273 | 105 | 1.60E-34 | – | |
| SUPERFAMILY | 176 | 268 | 93 | 1.06E-24 | ||
| Pfam | 176 | 272 | 97 | 6.80E-20 | ||
| TIGRFAM | 182 | 276 | 95 | 7.30E-12 | ||
| CDD | 182 | 271 | 90 | 6.76E-09 | – | |
| ProSiteProfiles | 229 | 283 | 55 | 12.235 | ||
| SMART | 232 | 274 | 43 | 2.80E-06 | ||
| MobiDBLite | 316 | 387 | 72 | – | – | |
| PANTHER | 340 | 793 | 454 | 0 | – | |
| PANTHER | 340 | 793 | 454 | 0 | – | |
| MobiDBLite | 403 | 429 | 27 | – | – | |
| ProSiteProfiles | 437 | 510 | 74 | 11.005 | ||
| SMART | 439 | 508 | 70 | 0.76 | ||
| Gene3D | 451 | 554 | 104 | 4.00E-32 | – | |
| CDD | 452 | 552 | 101 | 6.00E-11 | – | |
| SUPERFAMILY | 453 | 552 | 100 | 2.79E-24 | ||
| Pfam | 460 | 552 | 93 | 3.40E-19 | ||
| TIGRFAM | 463 | 552 | 90 | 1.70E-10 | ||
| ProSiteProfiles | 511 | 565 | 55 | 12.182 | ||
| SMART | 514 | 556 | 43 | 2.90E-08 | ||
| SUPERFAMILY | 625 | 784 | 160 | 2.05E-78 | ||
| Gene3D | 632 | 720 | 89 | 2.60E-24 | – | |
| CDD | 636 | 943 | 308 | 0 | – | |
| SMART | 638 | 924 | 287 | 7.10E-90 | ||
| ProSiteProfiles | 638 | 924 | 287 | 44.23 | ||
| Pfam | 640 | 924 | 285 | 1.40E-61 | ||
| ProSitePatterns | 644 | 667 | 24 | – | ||
| Gene3D | 721 | 954 | 234 | 1.50E-59 | – | |
| ProSitePatterns | 758 | 770 | 13 | – | ||
| SUPERFAMILY | 812 | 942 | 131 | 2.05E-78 | ||
| PANTHER | 816 | 944 | 129 | 0 | – | |
| PANTHER | 816 | 944 | 129 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v3117660.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3117660.5, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.