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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3119760 |
| Transcript ID | Lj3g3v3119760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Glycine max] gi|356577033|ref|XP_003556634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 75 | 415 | 341 | 2.30E-121 | – | |
| SUPERFAMILY | 85 | 221 | 137 | 6.54E-06 | ||
| ProSiteProfiles | 86 | 120 | 35 | 11.444 | ||
| Gene3D | 87 | 173 | 87 | 4.90E-06 | ||
| TIGRFAM | 89 | 121 | 33 | 4.60E-05 | ||
| Pfam | 89 | 118 | 30 | 6.90E-06 | ||
| Pfam | 120 | 168 | 49 | 4.80E-14 | ||
| ProSiteProfiles | 121 | 155 | 35 | 12.332 | ||
| TIGRFAM | 123 | 157 | 35 | 5.40E-07 | ||
| ProSiteProfiles | 156 | 190 | 35 | 12.671 | ||
| TIGRFAM | 159 | 192 | 34 | 4.10E-08 | ||
| Pfam | 221 | 271 | 51 | 1.40E-13 | ||
| ProSiteProfiles | 222 | 258 | 37 | 11.619 | ||
| TIGRFAM | 224 | 260 | 37 | 4.40E-06 | ||
| Gene3D | 225 | 359 | 135 | 4.90E-06 | ||
| SUPERFAMILY | 258 | 327 | 70 | 6.54E-06 | ||
| ProSiteProfiles | 259 | 293 | 35 | 11.827 | ||
| TIGRFAM | 262 | 294 | 33 | 4.50E-07 | ||
| Pfam | 282 | 332 | 51 | 0.0013 | ||
| ProSiteProfiles | 294 | 328 | 35 | 10.435 | ||
| TIGRFAM | 297 | 328 | 32 | 5.50E-05 | ||
| Pfam | 336 | 385 | 50 | 2.30E-11 | ||
| ProSiteProfiles | 337 | 371 | 35 | 11.531 | ||
| TIGRFAM | 339 | 373 | 35 | 1.80E-06 | ||
| ProSiteProfiles | 372 | 402 | 31 | 7.18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v3119760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3119760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.