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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3237920 |
| Transcript ID | Lj3g3v3237920.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GTPase Der-like [Glycine max] gi|356542027|ref|XP_003539473.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 92 | 192 | 101 | 0 | – | |
| PANTHER | 92 | 192 | 101 | 0 | – | |
| Gene3D | 131 | 328 | 198 | 1.60E-41 | ||
| Hamap | 133 | 607 | 475 | 35.893 | ||
| SUPERFAMILY | 134 | 191 | 58 | 3.72E-33 | ||
| ProSiteProfiles | 134 | 329 | 196 | 55.486 | ||
| Pfam | 135 | 282 | 148 | 2.00E-24 | ||
| CDD | 137 | 325 | 189 | 2.74E-71 | – | |
| SUPERFAMILY | 219 | 327 | 109 | 3.72E-33 | ||
| TIGRFAM | 227 | 603 | 377 | 5.90E-116 | ||
| PANTHER | 229 | 646 | 418 | 0 | – | |
| PANTHER | 229 | 646 | 418 | 0 | – | |
| SUPERFAMILY | 302 | 608 | 307 | 5.35E-53 | ||
| Gene3D | 338 | 527 | 190 | 9.90E-44 | ||
| ProSiteProfiles | 341 | 521 | 181 | 59.747 | ||
| TIGRFAM | 341 | 509 | 169 | 5.50E-24 | ||
| PRINTS | 343 | 363 | 21 | 5.10E-09 | ||
| CDD | 343 | 516 | 174 | 2.82E-76 | – | |
| Pfam | 343 | 464 | 122 | 4.20E-23 | ||
| PRINTS | 417 | 435 | 19 | 5.10E-09 | ||
| Pfam | 523 | 604 | 82 | 2.40E-30 | ||
| Gene3D | 528 | 606 | 79 | 1.10E-32 | ||
| MobiDBLite | 610 | 647 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj3g3v3237920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3237920.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.