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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3430180 |
| Transcript ID | Lj3g3v3430180.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | U-box domain-containing protein [Medicago truncatula] gi|357455815|ref|XP_003598188.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 35 | 35 | 1.20E-276 | – | |
| PANTHER | 1 | 35 | 35 | 1.20E-276 | – | |
| CDD | 21 | 172 | 152 | 1.10E-42 | – | |
| Gene3D | 21 | 147 | 127 | 1.70E-08 | ||
| MobiDBLite | 192 | 218 | 27 | – | – | |
| MobiDBLite | 244 | 277 | 34 | – | – | |
| Coils | 324 | 344 | 21 | – | – | |
| PANTHER | 374 | 723 | 350 | 1.20E-276 | – | |
| PANTHER | 374 | 723 | 350 | 1.20E-276 | – | |
| Coils | 406 | 428 | 23 | – | – | |
| SUPERFAMILY | 433 | 706 | 274 | 1.03E-66 | ||
| Gene3D | 434 | 510 | 77 | 1.60E-24 | – | |
| ProSiteProfiles | 451 | 712 | 262 | 33.644 | ||
| SMART | 451 | 712 | 262 | 1.40E-27 | ||
| Pfam | 456 | 706 | 251 | 6.50E-41 | ||
| ProSitePatterns | 457 | 478 | 22 | – | ||
| Gene3D | 511 | 707 | 197 | 7.10E-39 | – | |
| ProSitePatterns | 569 | 581 | 13 | – | ||
| SUPERFAMILY | 730 | 802 | 73 | 2.03E-24 | – | |
| ProSiteProfiles | 734 | 805 | 72 | 33.27 | ||
| Gene3D | 735 | 802 | 68 | 6.60E-24 | ||
| Pfam | 736 | 802 | 67 | 4.10E-19 | ||
| SMART | 738 | 800 | 63 | 3.30E-29 | ||
| PANTHER | 744 | 801 | 58 | 1.20E-276 | – | |
| PANTHER | 744 | 801 | 58 | 1.20E-276 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj3g3v3430180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3430180.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.