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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3430180 |
| Transcript ID | Lj3g3v3430180.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | U-box domain-containing protein [Medicago truncatula] gi|357455815|ref|XP_003598188.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 35 | 35 | 7.80E-277 | – | |
| PANTHER | 1 | 35 | 35 | 7.80E-277 | – | |
| Gene3D | 21 | 139 | 119 | 5.50E-08 | ||
| CDD | 21 | 164 | 144 | 2.37E-43 | – | |
| SUPERFAMILY | 21 | 140 | 120 | 3.77E-05 | – | |
| MobiDBLite | 184 | 210 | 27 | – | – | |
| MobiDBLite | 236 | 269 | 34 | – | – | |
| Coils | 316 | 336 | 21 | – | – | |
| PANTHER | 366 | 715 | 350 | 7.80E-277 | – | |
| PANTHER | 366 | 715 | 350 | 7.80E-277 | – | |
| Coils | 398 | 420 | 23 | – | – | |
| SUPERFAMILY | 425 | 698 | 274 | 1.01E-66 | ||
| Gene3D | 426 | 502 | 77 | 1.50E-24 | – | |
| ProSiteProfiles | 443 | 704 | 262 | 33.644 | ||
| SMART | 443 | 704 | 262 | 1.40E-27 | ||
| Pfam | 448 | 698 | 251 | 6.30E-41 | ||
| ProSitePatterns | 449 | 470 | 22 | – | ||
| Gene3D | 503 | 699 | 197 | 7.00E-39 | – | |
| ProSitePatterns | 561 | 573 | 13 | – | ||
| SUPERFAMILY | 722 | 794 | 73 | 2.03E-24 | – | |
| ProSiteProfiles | 726 | 797 | 72 | 33.27 | ||
| Gene3D | 727 | 794 | 68 | 6.60E-24 | ||
| Pfam | 728 | 794 | 67 | 4.10E-19 | ||
| SMART | 730 | 792 | 63 | 3.30E-29 | ||
| PANTHER | 736 | 793 | 58 | 7.80E-277 | – | |
| PANTHER | 736 | 793 | 58 | 7.80E-277 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj3g3v3430180.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3430180.2, powered by CORGI.
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