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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3690010 |
| Transcript ID | Lj3g3v3690010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 42 kDa peptidyl-prolyl isomerase-like [Glycine max] gi|356542700|ref|XP_003539804.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 345 | 345 | – | – | |
| MobiDBLite | 1 | 46 | 46 | – | – | |
| PANTHER | 38 | 357 | 320 | 3.40E-138 | ||
| PANTHER | 38 | 357 | 320 | 3.40E-138 | – | |
| Gene3D | 46 | 189 | 144 | 7.30E-25 | – | |
| SUPERFAMILY | 49 | 172 | 124 | 3.73E-20 | – | |
| Pfam | 70 | 163 | 94 | 6.40E-13 | ||
| ProSiteProfiles | 74 | 166 | 93 | 16.83 | ||
| SUPERFAMILY | 178 | 328 | 151 | 5.58E-25 | ||
| ProSiteProfiles | 186 | 219 | 34 | 6.756 | ||
| SMART | 186 | 219 | 34 | 12 | ||
| ProSiteProfiles | 186 | 219 | 34 | 7.037 | ||
| Gene3D | 190 | 328 | 139 | 1.80E-26 | ||
| SMART | 237 | 270 | 34 | 0.093 | ||
| ProSiteProfiles | 237 | 270 | 34 | 5.399 | ||
| ProSiteProfiles | 237 | 304 | 68 | 12.932 | ||
| ProSiteProfiles | 271 | 304 | 34 | 8.526 | ||
| SMART | 271 | 304 | 34 | 0.0016 | ||
| Pfam | 272 | 303 | 32 | 0.022 | ||
| Phobius | 346 | 365 | 20 | – | – | |
| TMHMM | 346 | 365 | 20 | – | – | |
| Phobius | 366 | 373 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v3690010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3690010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.