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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0149440 |
| Transcript ID | Lj4g3v0149440.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g35030, mitochondrial-like [Cicer arietinum] gi|502123470|ref|XP_004498123.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 393 | 385 | 0 | – | |
| PANTHER | 9 | 393 | 385 | 0 | – | |
| Pfam | 16 | 45 | 30 | 8.20E-08 | ||
| ProSiteProfiles | 18 | 48 | 31 | 10.709 | ||
| TIGRFAM | 21 | 50 | 30 | 3.50E-07 | ||
| Gene3D | 28 | 277 | 250 | 1.10E-16 | ||
| ProSiteProfiles | 49 | 83 | 35 | 12.956 | ||
| Pfam | 51 | 80 | 30 | 2.90E-10 | ||
| TIGRFAM | 51 | 80 | 30 | 1.10E-08 | ||
| SUPERFAMILY | 59 | 280 | 222 | 2.78E-05 | ||
| TIGRFAM | 83 | 109 | 27 | 5.00E-04 | ||
| ProSiteProfiles | 84 | 110 | 27 | 6.314 | ||
| Pfam | 110 | 158 | 49 | 3.60E-12 | ||
| ProSiteProfiles | 111 | 145 | 35 | 11.246 | ||
| TIGRFAM | 113 | 147 | 35 | 6.70E-08 | ||
| ProSiteProfiles | 147 | 181 | 35 | 6.018 | ||
| ProSiteProfiles | 182 | 213 | 32 | 6.785 | ||
| Pfam | 187 | 208 | 22 | 0.14 | ||
| Pfam | 215 | 262 | 48 | 1.90E-10 | ||
| ProSiteProfiles | 215 | 249 | 35 | 11.137 | ||
| TIGRFAM | 217 | 250 | 34 | 1.30E-06 | ||
| ProSiteProfiles | 250 | 280 | 31 | 8.243 | ||
| ProSiteProfiles | 286 | 316 | 31 | 5.996 | ||
| Gene3D | 346 | 373 | 28 | 1.10E-16 | ||
| ProSiteProfiles | 352 | 386 | 35 | 9.745 | ||
| Pfam | 355 | 384 | 30 | 0.0094 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0149440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0149440.1, powered by CORGI.
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