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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0153950 |
| Transcript ID | Lj4g3v0153950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Calcium-independent phospholipase A2-gamma [Medicago truncatula] gi|357480239|ref|XP_003610405.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 410 | 398 | 0 | – | |
| PANTHER | 13 | 410 | 398 | 0 | – | |
| MobiDBLite | 18 | 53 | 36 | – | – | |
| Gene3D | 169 | 306 | 138 | 7.20E-29 | ||
| SUPERFAMILY | 169 | 306 | 138 | 4.18E-27 | – | |
| SMART | 194 | 215 | 22 | 0.041 | ||
| Pfam | 195 | 253 | 59 | 2.60E-08 | ||
| ProSiteProfiles | 196 | 217 | 22 | 7.512 | ||
| SMART | 217 | 240 | 24 | 8.6 | ||
| ProSiteProfiles | 219 | 240 | 22 | 5.956 | ||
| ProSiteProfiles | 242 | 262 | 21 | 5.04 | ||
| SMART | 263 | 286 | 24 | 12 | ||
| ProSiteProfiles | 265 | 286 | 22 | 6.734 | ||
| ProSiteProfiles | 287 | 308 | 22 | 4.893 | ||
| SUPERFAMILY | 344 | 530 | 187 | 3.84E-24 | ||
| Gene3D | 345 | 529 | 185 | 5.90E-24 | ||
| Pfam | 355 | 394 | 40 | 5.50E-07 | ||
| CDD | 363 | 477 | 115 | 6.86E-07 | – | |
| PANTHER | 471 | 704 | 234 | 0 | – | |
| PANTHER | 471 | 704 | 234 | 0 | – | |
| CDD | 531 | 886 | 356 | 6.71E-143 | – | |
| Gene3D | 534 | 898 | 365 | 1.20E-64 | – | |
| SUPERFAMILY | 536 | 613 | 78 | 4.50E-46 | ||
| Pfam | 541 | 782 | 242 | 6.40E-21 | ||
| SUPERFAMILY | 640 | 700 | 61 | 4.50E-46 | ||
| PANTHER | 726 | 1325 | 600 | 0 | – | |
| PANTHER | 726 | 1325 | 600 | 0 | – | |
| SUPERFAMILY | 734 | 891 | 158 | 4.50E-46 | ||
| MobiDBLite | 1243 | 1262 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj4g3v0153950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0153950.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.