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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0166160 |
| Transcript ID | Lj4g3v0166160.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356512257|ref|XP_003524837.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 87 | 87 | – | – | |
| PANTHER | 3 | 310 | 308 | 1.20E-168 | ||
| PANTHER | 3 | 310 | 308 | 1.20E-168 | – | |
| SUPERFAMILY | 41 | 255 | 215 | 3.79E-14 | ||
| Gene3D | 59 | 248 | 190 | 4.00E-07 | – | |
| CDD | 63 | 252 | 190 | 4.44E-06 | ||
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 88 | 106 | 19 | – | – | |
| ProSitePatterns | 102 | 126 | 25 | – | ||
| Phobius | 107 | 112 | 6 | – | – | |
| Phobius | 113 | 139 | 27 | – | – | |
| Pfam | 113 | 278 | 166 | 5.60E-57 | ||
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 140 | 158 | 19 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 159 | 182 | 24 | – | – | |
| Phobius | 183 | 202 | 20 | – | – | |
| TMHMM | 200 | 222 | 23 | – | – | |
| Phobius | 203 | 222 | 20 | – | – | |
| Phobius | 223 | 227 | 5 | – | – | |
| TMHMM | 226 | 248 | 23 | – | – | |
| Phobius | 228 | 248 | 21 | – | – | |
| Phobius | 249 | 311 | 63 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0166160.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0166160.3, powered by CORGI.
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