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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0286230 |
| Transcript ID | Lj4g3v0286230.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: disease resistance protein RGA2-like [Vitis vinifera] gi|359491491|ref|XP_003634282.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 667 | 667 | 3.80E-250 | – | |
| Phobius | 1 | 17 | 17 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 667 | 667 | 3.80E-250 | – | |
| CDD | 2 | 137 | 136 | 9.13E-13 | – | |
| Phobius | 3 | 13 | 11 | – | – | |
| Phobius | 14 | 17 | 4 | – | – | |
| Phobius | 18 | 667 | 650 | – | – | |
| SUPERFAMILY | 165 | 443 | 279 | 6.54E-68 | ||
| Gene3D | 180 | 330 | 151 | 1.30E-14 | ||
| Pfam | 181 | 470 | 290 | 1.20E-63 | ||
| PRINTS | 203 | 218 | 16 | 4.30E-20 | – | |
| PRINTS | 278 | 292 | 15 | 4.30E-20 | – | |
| PRINTS | 380 | 394 | 15 | 4.30E-20 | – | |
| Gene3D | 418 | 465 | 48 | 1.30E-13 | ||
| SUPERFAMILY | 520 | 664 | 145 | 3.63E-15 | ||
| Gene3D | 588 | 661 | 74 | 1.30E-13 | ||
| PRINTS | 621 | 637 | 17 | 4.30E-20 | – | |
| Pfam | 625 | 647 | 23 | 0.29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj4g3v0286230.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0286230.1, powered by CORGI.
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