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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0343340 |
| Transcript ID | Lj4g3v0343340.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 11-like [Glycine max] gi|356551120|ref|XP_003543926.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 388 | 388 | – | – | |
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 34 | 653 | 620 | 0 | – | |
| PANTHER | 34 | 653 | 620 | 0 | – | |
| ProSiteProfiles | 52 | 298 | 247 | 16.82 | ||
| Gene3D | 52 | 284 | 233 | 4.90E-48 | ||
| SUPERFAMILY | 52 | 285 | 234 | 5.77E-41 | ||
| Pfam | 73 | 223 | 151 | 9.40E-25 | ||
| SMART | 81 | 270 | 190 | 4.10E-12 | ||
| ProSitePatterns | 195 | 209 | 15 | – | ||
| Pfam | 372 | 585 | 214 | 3.40E-36 | ||
| Phobius | 389 | 411 | 23 | – | – | |
| TMHMM | 389 | 411 | 23 | – | – | |
| Phobius | 412 | 422 | 11 | – | – | |
| Phobius | 423 | 442 | 20 | – | – | |
| TMHMM | 424 | 446 | 23 | – | – | |
| Phobius | 443 | 462 | 20 | – | – | |
| TMHMM | 461 | 495 | 35 | – | – | |
| Phobius | 463 | 490 | 28 | – | – | |
| Phobius | 491 | 501 | 11 | – | – | |
| Phobius | 502 | 524 | 23 | – | – | |
| TMHMM | 502 | 524 | 23 | – | – | |
| Phobius | 525 | 530 | 6 | – | – | |
| Phobius | 531 | 552 | 22 | – | – | |
| TMHMM | 534 | 556 | 23 | – | – | |
| Phobius | 553 | 619 | 67 | – | – | |
| Phobius | 620 | 641 | 22 | – | – | |
| Phobius | 642 | 673 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj4g3v0343340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0343340.1, powered by CORGI.
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