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Lj4g3v0445350.1

Overview

Field Value
Gene ID Lj4g3v0445350
Transcript ID Lj4g3v0445350.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Disease resistance protein [Medicago truncatula] gi|357475945|ref|XP_003608258.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155:SF639
1 625 625 1.70E-187 –
PANTHER
PTHR23155
1 625 625 1.70E-187 –
SUPERFAMILY
SSF52540
150 416 267 1.22E-48
IPR027417
CDD
cd00009
157 267 111 1.35E-06 –
Gene3D
G3DSA:3.40.50.300
162 301 140 3.50E-13
IPR027417
Pfam
PF00931
164 441 278 1.60E-74
IPR002182
SMART
SM00382
174 319 146 9.60E-06
IPR003593
PRINTS
PR00364
177 192 16 5.00E-21 –
PRINTS
PR00364
254 268 15 5.00E-21 –
PRINTS
PR00364
349 363 15 5.00E-21 –
SUPERFAMILY
SSF52058
481 607 127 2.72E-08
IPR032675
Gene3D
G3DSA:3.80.10.10
544 595 52 6.40E-04
IPR032675
PRINTS
PR00364
569 585 17 5.00E-21 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v0445350.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0445350.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.