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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0668230 |
| Transcript ID | Lj4g3v0668230.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 498 | 498 | 5.30E-268 | – | |
| PANTHER | 1 | 498 | 498 | 5.30E-268 | ||
| Gene3D | 3 | 123 | 121 | 2.20E-10 | ||
| SUPERFAMILY | 3 | 196 | 194 | 1.93E-18 | ||
| Pfam | 4 | 115 | 112 | 9.30E-06 | ||
| Gene3D | 124 | 199 | 76 | 4.00E-05 | – | |
| Gene3D | 218 | 397 | 180 | 2.90E-54 | ||
| SUPERFAMILY | 219 | 481 | 263 | 9.89E-58 | ||
| CDD | 226 | 386 | 161 | 2.41E-20 | – | |
| SMART | 253 | 389 | 137 | 2.10E-14 | ||
| Pfam | 257 | 384 | 128 | 2.70E-38 | ||
| Gene3D | 398 | 474 | 77 | 6.40E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Peroxisomal membrane | The lipid bilayer surrounding a peroxisome. | ||
| Biological process | Protein targeting to peroxisome | The process of directing proteins towards the peroxisome, usually using signals contained within the protein. | ||
| Molecular function | ATPase activity, coupled | Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction directly drives some other reaction, for example ion transport across a membrane. |
Expression pattern of Lj4g3v0668230.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0668230.2, powered by CORGI.
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