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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1722980 |
| Transcript ID | Lj4g3v1722980.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter B family member 25-like isoform X1 [Cicer arietinum] gi|502151879|ref|XP_004508658.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 61 | 61 | – | – | |
| MobiDBLite | 1 | 38 | 38 | – | – | |
| PANTHER | 11 | 502 | 492 | 0 | – | |
| PANTHER | 11 | 502 | 492 | 0 | – | |
| Gene3D | 50 | 366 | 317 | 9.70E-88 | – | |
| SUPERFAMILY | 50 | 366 | 317 | 5.23E-73 | ||
| Phobius | 62 | 79 | 18 | – | – | |
| Pfam | 63 | 334 | 272 | 2.00E-61 | ||
| ProSiteProfiles | 63 | 353 | 291 | 54.703 | ||
| Phobius | 80 | 109 | 30 | – | – | |
| Phobius | 110 | 131 | 22 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 132 | 209 | 78 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| Phobius | 210 | 229 | 20 | – | – | |
| Phobius | 230 | 289 | 60 | – | – | |
| Phobius | 290 | 318 | 29 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 319 | 329 | 11 | – | – | |
| TMHMM | 329 | 351 | 23 | – | – | |
| Phobius | 330 | 351 | 22 | – | – | |
| Phobius | 352 | 508 | 157 | – | – | |
| SUPERFAMILY | 380 | 504 | 125 | 8.14E-32 | ||
| Gene3D | 387 | 500 | 114 | 2.40E-33 | ||
| Pfam | 405 | 491 | 87 | 1.40E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1722980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1722980.1, powered by CORGI.
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