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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2136040 |
| Transcript ID | Lj4g3v2136040.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356562099|ref|XP_003549311.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 3 | 42 | 40 | 0 | ||
| PANTHER | 3 | 42 | 40 | 0 | – | |
| Phobius | 12 | 23 | 12 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 823 | 795 | – | – | |
| Pfam | 30 | 133 | 104 | 1.70E-20 | ||
| PANTHER | 70 | 817 | 748 | 0 | – | |
| PANTHER | 70 | 817 | 748 | 0 | ||
| SUPERFAMILY | 86 | 133 | 48 | 3.17E-06 | ||
| Gene3D | 87 | 135 | 49 | 3.10E-09 | ||
| SUPERFAMILY | 135 | 180 | 46 | 3.14E-73 | ||
| CDD | 136 | 639 | 504 | 6.37E-120 | – | |
| Gene3D | 159 | 384 | 226 | 7.50E-70 | ||
| PRINTS | 160 | 179 | 20 | 3.50E-16 | ||
| Pfam | 160 | 670 | 511 | 1.30E-46 | ||
| ProSitePatterns | 165 | 176 | 12 | – | ||
| SUPERFAMILY | 208 | 413 | 206 | 3.14E-73 | ||
| PRINTS | 239 | 252 | 14 | 3.50E-16 | ||
| CDD | 382 | 520 | 139 | 5.85E-12 | – | |
| Gene3D | 543 | 680 | 138 | 7.50E-70 | ||
| SUPERFAMILY | 547 | 684 | 138 | 3.14E-73 | ||
| PRINTS | 602 | 618 | 17 | 3.50E-16 | ||
| ProSitePatterns | 603 | 613 | 11 | – | ||
| Pfam | 722 | 817 | 96 | 1.50E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Cellular component | Cell wall | The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj4g3v2136040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2136040.1, powered by CORGI.
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