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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2172820 |
| Transcript ID | Lj4g3v2172820.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: U-box domain-containing protein 34-like [Glycine max] gi|356564780|ref|XP_003550626.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 128 | 126 | 1.90E-11 | ||
| SUPERFAMILY | 6 | 160 | 155 | 3.77E-08 | – | |
| CDD | 6 | 159 | 154 | 3.52E-43 | – | |
| Coils | 267 | 287 | 21 | – | – | |
| PANTHER | 323 | 682 | 360 | 3.70E-210 | – | |
| PANTHER | 323 | 682 | 360 | 3.70E-210 | – | |
| Coils | 334 | 380 | 47 | – | – | |
| Gene3D | 389 | 467 | 79 | 6.00E-27 | – | |
| SUPERFAMILY | 391 | 663 | 273 | 6.34E-67 | ||
| SMART | 408 | 671 | 264 | 1.60E-27 | ||
| ProSiteProfiles | 408 | 696 | 289 | 33.983 | ||
| Pfam | 413 | 664 | 252 | 7.20E-42 | ||
| ProSitePatterns | 414 | 435 | 22 | – | ||
| Gene3D | 468 | 663 | 196 | 1.60E-39 | – | |
| ProSitePatterns | 526 | 538 | 13 | – | ||
| SUPERFAMILY | 686 | 757 | 72 | 1.32E-21 | – | |
| ProSiteProfiles | 690 | 763 | 74 | 27.821 | ||
| Pfam | 692 | 757 | 66 | 5.60E-16 | ||
| Gene3D | 692 | 758 | 67 | 3.40E-22 | ||
| SMART | 694 | 756 | 63 | 1.40E-24 | ||
| PANTHER | 700 | 757 | 58 | 3.70E-210 | – | |
| PANTHER | 700 | 757 | 58 | 3.70E-210 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj4g3v2172820.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2172820.2, powered by CORGI.
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