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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2249170 |
| Transcript ID | Lj4g3v2249170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max] gi|356564672|ref|XP_003550575.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | – | – | |
| Phobius | 1 | 555 | 555 | – | – | |
| Pfam | 128 | 178 | 51 | 8.00E-08 | ||
| ProSiteProfiles | 188 | 460 | 273 | 13.679 | ||
| Gene3D | 196 | 285 | 90 | 1.10E-35 | ||
| SUPERFAMILY | 200 | 291 | 92 | 1.46E-31 | ||
| Pfam | 203 | 385 | 183 | 1.90E-15 | ||
| SMART | 212 | 437 | 226 | 4.80E-08 | ||
| PANTHER | 246 | 761 | 516 | 0 | – | |
| PANTHER | 246 | 761 | 516 | 0 | – | |
| SUPERFAMILY | 319 | 460 | 142 | 1.46E-31 | ||
| Gene3D | 320 | 449 | 130 | 1.10E-35 | ||
| Pfam | 539 | 750 | 212 | 1.90E-39 | ||
| TMHMM | 555 | 577 | 23 | – | – | |
| Phobius | 556 | 577 | 22 | – | – | |
| Phobius | 578 | 588 | 11 | – | – | |
| Phobius | 589 | 611 | 23 | – | – | |
| TMHMM | 598 | 620 | 23 | – | – | |
| Phobius | 612 | 630 | 19 | – | – | |
| TMHMM | 630 | 652 | 23 | – | – | |
| Phobius | 631 | 661 | 31 | – | – | |
| Phobius | 662 | 672 | 11 | – | – | |
| TMHMM | 673 | 695 | 23 | – | – | |
| Phobius | 673 | 693 | 21 | – | – | |
| Phobius | 694 | 698 | 5 | – | – | |
| Phobius | 699 | 720 | 22 | – | – | |
| TMHMM | 699 | 721 | 23 | – | – | |
| Phobius | 721 | 767 | 47 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj4g3v2249170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2249170.1, powered by CORGI.
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