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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029481
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We have found 49 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.561s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0252699.1
n.a. PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502174313|ref|XP_004515482.1| chr0 131109876 131121879 +
2 domain predictions
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Lj0g3v0332169.2
n.a. PREDICTED: ABC transporter G family member 36-like [Cicer arietinum] gi|502156086|ref|XP_004510308.1| chr0 173763819 173770468 -
2 domain predictions
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Lj1g3v1914990.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356515478|ref|XP_003526427.1| chr1 22803773 22810507 +
2 domain predictions
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Lj1g3v1914990.2
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356515478|ref|XP_003526427.1| chr1 22803773 22813470 +
2 domain predictions
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Lj1g3v4528450.2
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357510221|ref|XP_003625399.1| chr1 53355866 53366721 -
2 domain predictions
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Lj1g3v4528450.3
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357510221|ref|XP_003625399.1| chr1 53355866 53364884 -
2 domain predictions
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Lj1g3v4701870.2
n.a. PREDICTED: ABC transporter G family member 39-like [Cicer arietinum] gi|502111745|ref|XP_004494154.1| chr1 56100200 56110578 -
2 domain predictions
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Lj3g3v0128220.1
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357455075|ref|XP_003597818.1| chr3 929252 936636 +
2 domain predictions
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Lj3g3v0275800.1
n.a. PREDICTED: ABC transporter G family member 36-like isoform X1 [Cicer arietinum] gi|502081143|ref|XP_004486779.1| chr3 1706198 1719432 +
2 domain predictions
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Lj3g3v0275800.2
n.a. PREDICTED: ABC transporter G family member 36-like isoform X1 [Cicer arietinum] gi|502081143|ref|XP_004486779.1| chr3 1706199 1719432 +
2 domain predictions
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Lj3g3v2318010.1
n.a. PREDICTED: ABC transporter G family member 36-like [Cicer arietinum] gi|502156086|ref|XP_004510308.1| chr3 28683414 28692959 +
2 domain predictions
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Lj4g3v2249150.1
n.a. PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max] gi|356565445|ref|XP_003550950.1| chr4 31036661 31047626 +
2 domain predictions
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Lj4g3v2249170.1
n.a. PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max] gi|356564672|ref|XP_003550575.1| chr4 31050859 31060611 -
2 domain predictions
 –
Lj5g3v0540130.1
n.a. PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356563840|ref|XP_003550166.1| chr5 6488000 6497092 +
2 domain predictions
 –
Lj5g3v0540160.1
n.a. Pleiotropic drug resistance protein [Medicago truncatula] gi|357455077|ref|XP_003597819.1| chr5 6506336 6509135 +
2 domain predictions
 –
Lj5g3v1772520.1
n.a. PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502118284|ref|XP_004496191.1| chr5 25198260 25209213 -
2 domain predictions
 –
LotjaGi1g1v0120700.1
n.a. ABC transporter family protein; TAIR: AT2G29940.1 pleiotropic drug resistance 3; Swiss-Prot: sp|Q7PC88|AB31G_ARATH ABC transporter G family member 31; TrEMBL-Plants: tr|K7M810|K7M810_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120700 LjG1.1_chr1 19030745 19044270 -
2 domain predictions
 –
LotjaGi1g1v0387600.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1K8Y7|I1K8Y7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0387600 LjG1.1_chr1 87085497 87096881 +
2 domain predictions
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LotjaGi1g1v0678700.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT2G36380.1 pleiotropic drug resistance 6; Swiss-Prot: sp|Q7PC87|AB34G_ARATH ABC transporter G family member 34; TrEMBL-Plants: tr|K7MZ73|K7MZ73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678700 LjG1.1_chr1 124509808 124518228 +
2 domain predictions
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LotjaGi1g1v0678700.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G66950.1 pleiotropic drug resistance 11; Swiss-Prot: sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2; TrEMBL-Plants: tr|K7MZ72|K7MZ72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678700 LjG1.1_chr1 124510851 124514237 +
2 domain predictions
 –
LotjaGi1g1v0678800.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT2G36380.1 pleiotropic drug resistance 6; Swiss-Prot: sp|Q7PC87|AB34G_ARATH ABC transporter G family member 34; TrEMBL-Plants: tr|A0A0B2QFQ3|A0A0B2QFQ3_GLYSO ABC transporter G family member 39; Found in the gene: LotjaGi1g1v0678800 LjG1.1_chr1 124520281 124528254 +
2 domain predictions
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LotjaGi1g1v0703000.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703000 LjG1.1_chr1 127122441 127133930 +
2 domain predictions
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LotjaGi1g1v0703200.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151T5S1|A0A151T5S1_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi1g1v0703200 LjG1.1_chr1 127145827 127154829 +
2 domain predictions
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LotjaGi3g1v0013300.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SU42|A0A151SU42_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0013300 LjG1.1_chr3 1408386 1416153 +
2 domain predictions
 –
LotjaGi3g1v0013300.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A151SU42|A0A151SU42_CAJCA Pleiotropic drug resistance protein 1; Found in the gene: LotjaGi3g1v0013300 LjG1.1_chr3 1408517 1415834 +
2 domain predictions
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LotjaGi3g1v0021000.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2168459 2184806 +
2 domain predictions
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LotjaGi3g1v0021000.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2168471 2184806 +
2 domain predictions
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LotjaGi3g1v0021000.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171320 2183908 +
2 domain predictions
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LotjaGi3g1v0021000.4
n.a. ABC transporter family protein; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171525 2183908 +
2 domain predictions
 –
LotjaGi3g1v0021000.5
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9UP63|A0A0L9UP63_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0021000 LjG1.1_chr3 2171525 2183908 +
2 domain predictions
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LotjaGi3g1v0360600.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1KH54|I1KH54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0360600 LjG1.1_chr3 74328414 74337101 +
2 domain predictions
 –
LotjaGi3g1v0360700.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A0A1H9X9|A0A0A1H9X9_LOTJA ATP binding cassette transporter; Found in the gene: LotjaGi3g1v0360700 LjG1.1_chr3 74339767 74348081 +
2 domain predictions
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LotjaGi3g1v0360700.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|A0A0A1H9X9|A0A0A1H9X9_LOTJA ATP binding cassette transporter; Found in the gene: LotjaGi3g1v0360700 LjG1.1_chr3 74340466 74347048 +
2 domain predictions
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LotjaGi3g1v0370900.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76062965 76072738 +
2 domain predictions
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LotjaGi3g1v0370900.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063700 76072215 +
2 domain predictions
 –
LotjaGi3g1v0370900.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063700 76072215 +
2 domain predictions
 –
LotjaGi3g1v0370900.4
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|G7LGN0|G7LGN0_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi3g1v0370900 LjG1.1_chr3 76063843 76072215 +
2 domain predictions
 –
LotjaGi4g1v0264900.1
n.a. ABC transporter family protein; TAIR: AT2G26910.1 pleiotropic drug resistance 4; Swiss-Prot: sp|O81016|AB32G_ARATH ABC transporter G family member 32; TrEMBL-Plants: tr|V7CC46|V7CC46_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0264900 LjG1.1_chr4 62951131 62961105 +
2 domain predictions
 –
LotjaGi4g1v0264900.2
n.a. ABC transporter family protein; TAIR: AT2G26910.1 pleiotropic drug resistance 4; Swiss-Prot: sp|O81016|AB32G_ARATH ABC transporter G family member 32; TrEMBL-Plants: tr|V7CC46|V7CC46_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0264900 LjG1.1_chr4 62951489 62960499 +
2 domain predictions
 –
LotjaGi4g1v0264900.3
n.a. ABC transporter family protein; TAIR: AT2G26910.1 pleiotropic drug resistance 4; Swiss-Prot: sp|O81016|AB32G_ARATH ABC transporter G family member 32; TrEMBL-Plants: tr|V7CC46|V7CC46_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0264900 LjG1.1_chr4 62951489 62960499 +
2 domain predictions
 –
LotjaGi4g1v0264900.4
n.a. ABC transporter family protein; TAIR: AT2G26910.1 pleiotropic drug resistance 4; Swiss-Prot: sp|O81016|AB32G_ARATH ABC transporter G family member 32; TrEMBL-Plants: tr|I1MUE5|I1MUE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0264900 LjG1.1_chr4 62951489 62960499 +
2 domain predictions
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LotjaGi4g1v0313000.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT3G53480.1 pleiotropic drug resistance 9; Swiss-Prot: sp|Q5W274|PDR3_TOBAC Pleiotropic drug resistance protein 3; TrEMBL-Plants: tr|A0A151SSF9|A0A151SSF9_CAJCA Pleiotropic drug resistance protein 3; Found in the gene: LotjaGi4g1v0313000 LjG1.1_chr4 68966732 68976742 +
2 domain predictions
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LotjaGi5g1v0062200.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1MWN5|I1MWN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0062200 LjG1.1_chr5 10374996 10384747 +
2 domain predictions
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LotjaGi5g1v0062200.2
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1MWN5|I1MWN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0062200 LjG1.1_chr5 10375338 10384240 +
2 domain predictions
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LotjaGi5g1v0062300.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G15520.1 pleiotropic drug resistance 12; Swiss-Prot: sp|Q76CU2|PDR1_TOBAC Pleiotropic drug resistance protein 1; TrEMBL-Plants: tr|I1MWN5|I1MWN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0062300 LjG1.1_chr5 10384996 10400774 +
2 domain predictions
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LotjaGi5g1v0131400.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT2G36380.1 pleiotropic drug resistance 6; Swiss-Prot: sp|Q7PC87|AB34G_ARATH ABC transporter G family member 34; TrEMBL-Plants: tr|I1JFM7|I1JFM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0131400 LjG1.1_chr5 30473092 30486091 -
2 domain predictions
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LotjaGi5g1v0266600.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G66950.1 pleiotropic drug resistance 11; Swiss-Prot: sp|Q2PCF1|PDR2_NICPL Pleiotropic drug resistance protein 2; TrEMBL-Plants: tr|A0A072VZG4|A0A072VZG4_MEDTR Drug resistance transporter-like ABC domain protein; Found in the gene: LotjaGi5g1v0266600 LjG1.1_chr5 57847065 57858195 -
2 domain predictions
 –
LotjaGi5g1v0266600.3
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G66950.1 pleiotropic drug resistance 11; Swiss-Prot: sp|Q7PC84|AB39G_ARATH ABC transporter G family member 39; TrEMBL-Plants: tr|A0A0B2RZL6|A0A0B2RZL6_GLYSO Pleiotropic drug resistance protein 2; Found in the gene: LotjaGi5g1v0266600 LjG1.1_chr5 57847394 57857929 -
2 domain predictions
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LotjaGi6g1v0038400.1
n.a. Pleiotropic drug resistance ABC transporter; TAIR: AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein; Swiss-Prot: sp|Q9XIE2|AB36G_ARATH ABC transporter G family member 36; TrEMBL-Plants: tr|A0A0L9T9Z4|A0A0L9T9Z4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0038400 LjG1.1_chr6 7511550 7521692 -
2 domain predictions
 –