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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2298210 |
| Transcript ID | Lj4g3v2298210.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein / tetratricopeptide repeat-containing protein [Theobroma cacao] gi|508783988|gb|EOY31244.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | – | – | |
| PANTHER | 24 | 178 | 155 | 1.40E-271 | – | |
| PANTHER | 24 | 178 | 155 | 1.40E-271 | – | |
| SUPERFAMILY | 40 | 153 | 114 | 8.26E-25 | ||
| ProSiteProfiles | 41 | 74 | 34 | 8.437 | ||
| SMART | 41 | 74 | 34 | 0.33 | ||
| ProSiteProfiles | 41 | 148 | 108 | 18.356 | ||
| Gene3D | 41 | 164 | 124 | 4.70E-27 | ||
| SMART | 79 | 114 | 36 | 32 | ||
| SMART | 115 | 148 | 34 | 0.33 | ||
| ProSiteProfiles | 115 | 148 | 34 | 8.467 | ||
| MobiDBLite | 178 | 258 | 81 | – | – | |
| Gene3D | 276 | 344 | 69 | 7.30E-12 | – | |
| ProSiteProfiles | 281 | 358 | 78 | 13.131 | ||
| SMART | 281 | 358 | 78 | 2.10E-12 | ||
| SUPERFAMILY | 282 | 367 | 86 | 2.61E-15 | – | |
| Pfam | 283 | 355 | 73 | 1.20E-12 | ||
| CDD | 284 | 355 | 72 | 4.71E-09 | – | |
| PANTHER | 346 | 665 | 320 | 1.40E-271 | – | |
| PANTHER | 346 | 665 | 320 | 1.40E-271 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2298210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2298210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.