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Lj4g3v2468410.1

Overview

Field Value
Gene ID Lj4g3v2468410
Transcript ID Lj4g3v2468410.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: piriformospora indica-insensitive protein 2-like [Glycine max] gi|356528210|ref|XP_003532698.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27000
3 435 433 3.30E-192 –
PANTHER
PTHR27000:SF45
3 435 433 3.30E-192 –
SUPERFAMILY
SSF52058
70 365 296 2.72E-57
IPR032675
Gene3D
G3DSA:3.80.10.10
74 191 118 4.60E-26
IPR032675
Pfam
PF13855
109 169 61 1.90E-06
IPR001611
SMART
SM00369
132 155 24 260
IPR003591
SMART
SM00369
156 180 25 39
IPR003591
PRINTS
PR00019
159 172 14 7.50E-06 –
Gene3D
G3DSA:3.80.10.10
192 361 170 7.20E-41
IPR032675
SMART
SM00369
205 228 24 110
IPR003591
SMART
SM00369
229 253 25 87
IPR003591
Pfam
PF00560
232 253 22 1.4
IPR001611
Pfam
PF13855
278 338 61 1.20E-06
IPR001611
SMART
SM00369
325 350 26 56
IPR003591
PRINTS
PR00019
325 338 14 7.50E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj4g3v2468410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2468410.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.