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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2693580 |
| Transcript ID | Lj4g3v2693580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor-like protein kinase At1g11050-like [Glycine max] gi|356525375|ref|XP_003531300.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 247 | 224 | – | – | |
| PANTHER | 210 | 635 | 426 | 1.70E-174 | – | |
| PANTHER | 210 | 635 | 426 | 1.70E-174 | – | |
| Gene3D | 236 | 328 | 93 | 4.10E-14 | ||
| Phobius | 248 | 272 | 25 | – | – | |
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 273 | 646 | 374 | – | – | |
| SUPERFAMILY | 301 | 605 | 305 | 2.43E-75 | ||
| SMART | 321 | 591 | 271 | 1.40E-35 | ||
| ProSiteProfiles | 321 | 613 | 293 | 36.555 | ||
| Pfam | 323 | 535 | 213 | 2.50E-45 | ||
| ProSitePatterns | 327 | 349 | 23 | – | ||
| Gene3D | 329 | 404 | 76 | 2.50E-22 | – | |
| Gene3D | 405 | 535 | 131 | 4.60E-38 | – | |
| ProSitePatterns | 453 | 465 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v2693580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2693580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.