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Lj4g3v2742900.1

Overview

Field Value
Gene ID Lj4g3v2742900
Transcript ID Lj4g3v2742900.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphatidylinositol 4-kinase beta 1-like [Glycine max] gi|356525675|ref|XP_003531449.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10048:SF22
1 471 471 5.60E-286 –
PANTHER
PTHR10048
1 471 471 5.60E-286
IPR015433
Gene3D
G3DSA:3.30.1010.10
2 39 38 8.40E-30 –
SUPERFAMILY
SSF56112
5 31 27 1.12E-68
IPR011009
MobiDBLite
mobidb-lite
200 224 25 – –
CDD
cd05168
226 471 246 3.23E-161 –
SUPERFAMILY
SSF56112
248 466 219 1.12E-68
IPR011009
Gene3D
G3DSA:3.30.1010.10
256 301 46 8.40E-30 –
ProSiteProfiles
PS50290
256 471 216 54.284
IPR000403
Pfam
PF00454
257 323 67 4.60E-07
IPR000403
SMART
SM00146
257 471 215 1.50E-50
IPR000403
ProSitePatterns
PS00915
260 274 15 –
IPR018936
Gene3D
G3DSA:1.10.1070.11
302 467 166 1.50E-59
IPR000403
Pfam
PF00454
327 455 129 1.20E-22
IPR000403

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0046854
Biological process Phosphatidylinositol phosphorylation The process of introducing one or more phosphate groups into a phosphatidylinositol, any glycerophosphoinositol having one phosphatidyl group esterified to one of the hydroxy groups of inositol.
Subterm of
GO:0048015
Biological process Phosphatidylinositol-mediated signaling A series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj4g3v2742900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2742900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.