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Lj4g3v2963440.1

Overview

Field Value
Gene ID Lj4g3v2963440
Transcript ID Lj4g3v2963440.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: GMP synthase [glutamine]-hydrolyzing] gi|502139270|ref|XP_004503710.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11922
1 531 531 1.50E-289 –
PANTHER
PTHR11922:SF2
1 531 531 1.50E-289 –
Hamap
MF_00344
8 534 527 48.825
IPR022955
SUPERFAMILY
SSF52317
9 237 229 1.12E-46
IPR029062
ProSiteProfiles
PS51273
10 206 197 30.285
IPR017926
Gene3D
G3DSA:3.40.50.880
11 197 187 5.00E-45
IPR029062
CDD
cd01742
11 197 187 6.43E-84
IPR004739
TIGRFAM
TIGR00888
11 203 193 4.40E-59
IPR004739
PRINTS
PR00097
11 25 15 5.10E-05 –
Pfam
PF00117
13 199 187 4.60E-34
IPR017926
PRINTS
PR00097
55 64 10 5.10E-05 –
PRINTS
PR00096
55 64 10 4.70E-06 –
PRINTS
PR00096
86 97 12 4.70E-06 –
PRINTS
PR00097
86 97 12 5.10E-05 –
PRINTS
PR00097
176 189 14 5.10E-05 –
PRINTS
PR00096
176 189 14 4.70E-06 –
SUPERFAMILY
SSF52402
196 427 232 2.87E-51 –
ProSiteProfiles
PS51553
207 408 202 82.474
IPR025777
Gene3D
G3DSA:3.40.50.620
207 403 197 2.50E-51
IPR014729
TIGRFAM
TIGR00884
212 534 323 2.30E-138
IPR001674
CDD
cd01997
229 533 305 0
IPR001674
Gene3D
G3DSA:3.30.300.10
409 534 126 8.60E-49 –
SUPERFAMILY
SSF54810
413 534 122 2.48E-46 –
Pfam
PF00958
443 533 91 4.10E-41
IPR001674

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003922
Molecular function GMP synthase (glutamine-hydrolyzing) activity Catalysis of the reaction: ATP + xanthosine 5'-phosphate + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006164
Biological process Purine nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of
GO:0006177
Biological process GMP biosynthetic process The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.
Subterm of
GO:0016462
Molecular function Pyrophosphatase activity Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj4g3v2963440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2963440.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.