Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v3014740.2

Overview

Field Value
Gene ID Lj4g3v3014740
Transcript ID Lj4g3v3014740.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine max] gi|356513239|ref|XP_003525321.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
14 40 27 – –
PANTHER
PTHR27001
41 380 340 1.80E-259 –
PANTHER
PTHR27001:SF190
41 380 340 1.80E-259 –
SUPERFAMILY
SSF56112
50 347 298 3.10E-78
IPR011009
Gene3D
G3DSA:2.60.120.200
52 82 31 1.60E-07
IPR013320
ProSiteProfiles
PS50011
69 349 281 36.527
IPR000719
Pfam
PF07714
74 346 273 4.60E-45
IPR001245
ProSitePatterns
PS00107
75 104 30 –
IPR017441
CDD
cd14066
75 349 275 3.04E-89 –
Gene3D
G3DSA:3.30.200.20
83 140 58 1.70E-23 –
Gene3D
G3DSA:1.10.510.10
141 344 204 1.50E-43 –
ProSitePatterns
PS00108
195 207 13 –
IPR008271
MobiDBLite
mobidb-lite
354 384 31 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj4g3v3014740.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3014740.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.