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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3042720 |
| Transcript ID | Lj4g3v3042720.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat extensin-like protein 6-like [Glycine max] gi|356513183|ref|XP_003525293.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 6 | 24 | 19 | 1.70E-213 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| PANTHER | 6 | 24 | 19 | 1.70E-213 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 18 | 25 | 8 | – | – | |
| Phobius | 26 | 408 | 383 | – | – | |
| PANTHER | 54 | 387 | 334 | 1.70E-213 | – | |
| PANTHER | 54 | 387 | 334 | 1.70E-213 | – | |
| Pfam | 61 | 98 | 38 | 2.00E-04 | ||
| Gene3D | 61 | 352 | 292 | 1.60E-66 | ||
| SUPERFAMILY | 64 | 353 | 290 | 6.46E-51 | ||
| Pfam | 163 | 180 | 18 | 0.77 | ||
| PRINTS | 164 | 177 | 14 | 6.60E-05 | – | |
| PRINTS | 304 | 317 | 14 | 6.60E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v3042720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3042720.1, powered by CORGI.
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