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Lj4g3v3096070.1

Overview

Field Value
Gene ID Lj4g3v3096070
Transcript ID Lj4g3v3096070.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: 2Fe-2S ferredoxin-like isoform X1 [Cicer arietinum] gi|502080842|ref|XP_004486700.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23426
8 201 194 7.90E-91 –
PANTHER
PTHR23426:SF25
8 201 194 7.90E-91 –
Gene3D
G3DSA:3.10.20.30
81 185 105 9.80E-40
IPR012675
ProSiteProfiles
PS51085
85 188 104 10.441
IPR001041
SUPERFAMILY
SSF54292
86 185 100 1.67E-27
IPR001041
CDD
cd00207
87 177 91 7.08E-12
IPR001041
Pfam
PF00111
92 173 82 7.30E-12
IPR001041
PRINTS
PR00355
122 132 11 1.70E-11
IPR001055
ProSitePatterns
PS00814
122 132 11 –
IPR018298
PRINTS
PR00355
142 156 15 1.70E-11
IPR001055
PRINTS
PR00355
165 173 9 1.70E-11
IPR001055

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009055
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
Subterm of
GO:0051536
Molecular function Iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
Subterm of
GO:0051537
Molecular function 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj4g3v3096070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v3096070.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.